Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0216 ATGGAGAGGGATTTTCTGGGTCTGAACTCGAAAGAACCACTGGTTGTAGTCAAGGAAAAGATGAATAATGATAGCGGGTGCAAAGACACAGGTTTCACAAAGGGAGGAATGGTAAAATGGCCCTTCATGAACAAAGTATCTGTTCATCCTCATTTGATGTTTTTGAATACTCCTCAGAAATCTCTCAATCATGATGGACAAGGAGGCATTCATTTTTCCCTGGCACCATATCCTGCACTACATGATGTAGTTTATATGAATCGCCCTCATGATGTGAAGATGCTTTCAGTTCCCAAGCAAACAATTCCAGTTTCCATGGGACATCCATCCCTAAAGAATCATTTTACAACTGTTGGTCAGAATATGAATGCTTCTGGTATGAAACAGCCACTACTCAGGGCAATACCTGTTACAGCACCTCATTCAGTTCTTCCTATAGTTGGTGCTGATGCTGATGCTGCTCCTGGAATGACCAAAACATGTAACCGTGTGAAACCATCTGCATCTGTTCCTAAACTCACTATCTTCTATGCCGGAACTGTGAATGTCTTTGATGATATCTCTCCTCAAAAGGCACAAGCTATCATGTTGATGGCAAGGAATGACTTATCAGCTGCTTCTAATGTGGTAGTGCCTAATGTTGAGGCACCCAGATTGACACTGGCAGGAGGTGATGGTGTGCATGTTAGTAAAACCATGCCACTTTCAAGTCCTCTATCTCTTTCTTCACATATTGGTGCACAGTCACTTAGTGGTTCAAGTAGCAGTGATGAATTTTTGGCAGCTAAAACATCTGGTGGTACCCCTTTGTCTGTTAACACAGTGGAGACTCCTAAAGTAGTCAACACAACCACCATGCTGCCATCAGCTGTGCCACAGGCTCGCAAGGCATCATTGGCTCGATTTTTGGAGAAGCGCAAAGAAAGGGTATTGAGTGCAGCACCATATAACCTCAACAAACAAGAAGTATGA 972 0.4311 MERDFLGLNSKEPLVVVKEKMNNDSGCKDTGFTKGGMVKWPFMNKVSVHPHLMFLNTPQKSLNHDGQGGIHFSLAPYPALHDVVYMNRPHDVKMLSVPKQTIPVSMGHPSLKNHFTTVGQNMNASGMKQPLLRAIPVTAPHSVLPIVGADADAAPGMTKTCNRVKPSASVPKLTIFYAGTVNVFDDISPQKAQAIMLMARNDLSAASNVVVPNVEAPRLTLAGGDGVHVSKTMPLSSPLSLSSHIGAQSLSGSSSSDEFLAAKTSGGTPLSVNTVETPKVVNTTTMLPSAVPQARKASLARFLEKRKERVLSAAPYNLNKQEV* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0216 323 Pfam Jas motif 292 316 IPR018467 -
Pvu3g0216 323 ProSiteProfiles Tify domain profile. 166 201 IPR010399 -
Pvu3g0216 323 Pfam tify domain 172 199 IPR010399 -
Pvu3g0216 323 PANTHER PROTEIN TIFY 7 13 321 - -
Pvu3g0216 323 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 13 321 IPR040390 -
Pvu3g0216 323 SMART tify_2 166 201 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0216 Pvu-Chr3 1835558 1839603 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g0216 38 321 Tify Gene Family AT3G17860 35.577 5.95e-28 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Pvu3g0216 tify 5.6e-15 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g0216 3 1835558 1839603 Pvu3g0216 3 1835558 1839603 ECH