Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0200 ATGGACTCCAAGGCGATGACTTTCATAACCCACCAAGCCATTTTCAACGCGGTTCGATGTGGGGACCTTGAAGGGCTCAAGGAGAAGCTGAAGAATTGCATGGGTGAGGTCTCATCAGAAGGGGTCATTTCTGAGGTGATGTCTATGCAGAACGATGCAGGAGAAACTTTGTTGTATATAGCTGCTGAGATTGGTCATCTTGAGGTGTTCAGCTTCTTGCTTGGTTTGTGTGACTTGGAGGTGCGGAAGATCAGGGCCAACTCTGATATGAACGCCTTTCACATCGCAGCCAAAAGTGGCCATTTGGATATTGTAAAGGAAATTTTGAGCACTTGGCCTGAGGTTTGTAAGATATGCAACTCCTCTAACACTAGTCCCCTATATCTTGCTGCTGTTCACGATCATTTGGATGTGGTGAATGCAATATTGGATGTTGATGTGAGTTCAATGATGATAGTAAGGAAAAACGGCAAAACTGCATTGCATAATGCTGCTAGGTATGGCATCCTTCGCATTGTAAACGCACTGATTGCCCGTGATTCTGGAATAGTCTGCATCAAAGATAGAAAGGGTCAAACTGCATTACATATGGCTGTCAAAGGACAAAGTACTTCGGTGGTGGAAGAGATATTACAAGCTGATCTTACGATATTGAATGAACGAGATAAGAAGGGAAACACTGCTCTTCACATGGCTACCCGGAAAGCCCGTTCACAGATAGTGAGCCTCTTGTTAATCTACACAGCTATAGATGTCAATGCCATCAATAATCAGAAGGAAACAGCCTTGGATTTGGCAGATAAACTGCCATATGGAGATTCATCTTTGGAAATCAAGGAGGCCCTTACAGAATGTGGTGCCAAACATGCCAGGCATATTGGGAAAGTGAATGAAGCCATGGAACTAAAAAGAGCTGTGAGTGATATAAAACACGAGGTGCAATCACAGCTTATACAGAATGAAAAGACTCGCAGACGAGTTTCTGGTATTGCGAAGGAATTGCAGAAAATTCATAGAGAGGCAGTGCAGAACACCATCAATTCTGTCACAGTAGTATCCGTCCTCATTGGCTCAATAGCATTCATGGCCCTATTCAGCTTACCAGGTCAATATCGAAAGAAGCAACCGGAGGCAGGAGAGGCAAACATAGCCGATGATGTTGCCTTCAGTGCTTTCTGCCTTTTGAATGCTACAGCTCTTTTCATTTCTCTTGCAGTTGTTGTTGTTCAAATCACTTTGGTGGCTTGGGATACAAGGGCTCAAAGGCAGGTTGTGTCAGTGATTAACAAGCTTATGTGGGCTGCATGTTCTTGCACTTGTGGGGCTTTTCTTGCTATATGCTTTGTGGTGGTTGGAGAGGAAACATGGCTTGCTATTGGTGTCACCCTTTTAGGAGCACCAATTCTACTTGGCACTCTAGCATACTTGTGCTACTTTGTTTTTAGGAGACGTTTCGGACTCCGTGGTGATTCCCAGAGACTGGTCAAGAGACCAAGTGGAAGCAAATCTTTCTCATGGTCTTACTCAGTAAACATATCAGATGCAGATGATTATGATTCTGATCATGAGAAGATATATGCTCTGTGA 1587 0.4386 MDSKAMTFITHQAIFNAVRCGDLEGLKEKLKNCMGEVSSEGVISEVMSMQNDAGETLLYIAAEIGHLEVFSFLLGLCDLEVRKIRANSDMNAFHIAAKSGHLDIVKEILSTWPEVCKICNSSNTSPLYLAAVHDHLDVVNAILDVDVSSMMIVRKNGKTALHNAARYGILRIVNALIARDSGIVCIKDRKGQTALHMAVKGQSTSVVEEILQADLTILNERDKKGNTALHMATRKARSQIVSLLLIYTAIDVNAINNQKETALDLADKLPYGDSSLEIKEALTECGAKHARHIGKVNEAMELKRAVSDIKHEVQSQLIQNEKTRRRVSGIAKELQKIHREAVQNTINSVTVVSVLIGSIAFMALFSLPGQYRKKQPEAGEANIADDVAFSAFCLLNATALFISLAVVVVQITLVAWDTRAQRQVVSVINKLMWAACSCTCGAFLAICFVVVGEETWLAIGVTLLGAPILLGTLAYLCYFVFRRRFGLRGDSQRLVKRPSGSKSFSWSYSVNISDADDYDSDHEKIYAL* 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0200 528 PANTHER PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 2 528 - -
Pvu3g0200 528 Pfam Domain of unknown function 340 449 IPR026961 -
Pvu3g0200 528 Gene3D - 3 148 IPR036770 -
Pvu3g0200 528 Gene3D - 149 302 IPR036770 -
Pvu3g0200 528 SUPERFAMILY Ankyrin repeat 13 286 IPR036770 -
Pvu3g0200 528 PANTHER ANKYRIN REPEAT PLANT-LIKE PROTEIN 2 528 - -
Pvu3g0200 528 SMART ANK_2a 190 219 IPR002110 GO:0005515
Pvu3g0200 528 SMART ANK_2a 88 117 IPR002110 GO:0005515
Pvu3g0200 528 SMART ANK_2a 156 185 IPR002110 GO:0005515
Pvu3g0200 528 SMART ANK_2a 53 81 IPR002110 GO:0005515
Pvu3g0200 528 SMART ANK_2a 224 254 IPR002110 GO:0005515
Pvu3g0200 528 SMART ANK_2a 122 152 IPR002110 GO:0005515
Pvu3g0200 528 ProSiteProfiles Ankyrin repeat profile. 156 183 IPR002110 GO:0005515
Pvu3g0200 528 ProSiteProfiles Ankyrin repeat region circular profile. 224 245 - -
Pvu3g0200 528 Pfam Ankyrin repeats (3 copies) 190 254 IPR002110 GO:0005515
Pvu3g0200 528 Pfam Ankyrin repeats (3 copies) 51 109 IPR002110 GO:0005515
Pvu3g0200 528 Pfam Ankyrin repeats (3 copies) 122 179 IPR002110 GO:0005515
Pvu3g0200 528 ProSiteProfiles Ankyrin repeat region circular profile. 156 183 - -
Pvu3g0200 528 ProSiteProfiles Ankyrin repeat profile. 224 257 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0200 Pvu-Chr3 1731650 1735699 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g0200 1 528 Miscellaneous Gene Families AT2G01680 66.105 0.0 707
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g0200 3 1731650 1735699 Pvu3g0200 3 1731650 1735699 ECH