Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0199 ATGGCCGAATCGGTGATTCCGGCCGCCGTGCTTCGCAACCTCGCCGACAAGCTCTACGAGAAGCGCAAGAATGCAGCACTTGAGGTTGAGGGGATTGTGAAGCAGCTTGCTTCTTCTGGGGATCATGATAGGATAATTGCTGTGATCAATTTGTTGACTAACGAATTTACTTATTCGCCTCAAGCAAATCACCGGAAGGGAGGGTTGATAAGCTTAGCTGCTGCCACTGTTGGGTTGACCACTGAAGCTGCTCAGCATCTCGAGCTAATTGTGCCCCCTGTATTAAATTCTTTTGCTGATCAAGATAGTAGAGTTCGTTATTATGCTTGCGAAGCATTATACAACATAGCAAAGGTTGTGAGAGGAGATTTTATTATATTCTTCAACCAGATCTTTGATGCCTTATGCAAGCTTTCAGCAGACTCAGATGCCAATGTACAAAGTGCTGCTCATCTTTTAGATCGACTTGTGAAGGATATTGTAACCGAAAGTGATCAGTTCAGTATTGAAGAATTTATACCGTTGTTGAGGGAGCGCATGAATGTATTGAATCCATATGTTCGTCAGTTTTTGGTAGGATGGATTACTGTATTGGATAGTGTCCCAGATATTGACATGCTGGGTTTTCTTCCTGATTTTCTTGATGGTTTGTTTAATATGCTGAGCGATTCAAGTCATGAAATACGTCAACAGGCTGATTCAGCTCTTTCTGAGTTTCTTCAAGAGATTAAAAATTCACCATCTGTAGATTATGGTCGAATGGCGGAAATACTGGTACAAAGGGCAGGTTCTCCAGATGAATTTACTAGGTTAACAGCTATGACATGGATAAATGAGTTTGTCAAACTTGGTGGAGATCAGCTTGTTCCATATTATGCTGACATTCTTGGAGCCATTTTGCCTTGCATATCTGATAAAGAAGACAAAATTAGAGTGGTTGCTCGTGAAACCAATGAAGAGCTACGTGCAATCAAGGCTGATCCAACTGAAGCATTTGATGTAGGAGCAATCCTCTCCATTGCTAGGAGGCAACTATCTAATGAATGGGAGGCTACTCGAATTGAAGCTTTGCACTGGATATCAACCCTTTTATCCAGACATCGTAGTGAGGTTTTGATATTTCTGAATGACATATTTGATACCCTACTCAAAGCACTTTCAGATTCATCTGACGAGGTTGTGCTTCTAGTGCTTGATGTTCATGCATGCATTGCAAAAGATCCCCTCCACTTCCGGCAGCTTGTTGTTTTTCTAGTGCACAATTTCCAATTAGATAATTCTCTTTTGGAGAAGCGTGGTGCTCTGATAATCCGCCGCCTTTGTGTTCTTTTGAATGCTGAGAGAGTCTATCGAGAACTTTCTACAATATTAGAAGGAGAATCTGATTTGGATTTTGCATCAATTATGGTTCAGGCTTTGAATTTGATCTTACTTACATCATCAGAATTATCTGAGATTCGAGATCTTTTGAAGCAATCACTTGTAACTCCTGCTGGGAAAGACCTATATGATTCTCTGTATGCTTCTTGGTGTCATTCTCCAATGGCAATTATAAGTCTATGCTTTTTAGCTCAGACTTACCAACATGCCAGTGCTGTGATTCAATCACTCGTGGAGGAGGATATTAATGTCAAATTTTTGGTCCAACTGGATAGATTGATCCGCTTGATGGAAACTCCAATCTTTGCCTATCTTCGATTGCAGCTTCTTGAACCTGGAAGATATATTTGGTTATTCAAGGCTTTGTATGGTCTCCTGATGTTGCTTCCTCAGCAAAGTGCCGCCTTTAAGATACTAAAAACTCGTTTAAAAGCTGTGCCATCATATTCATTTAATGGTGAGCAATTGAAGAGAATGCCTTCTGGGGATCCCTACCAATTTCATAACGTGCCTGATGGATTTCGAACCATTGAGGATGGTGTTGTAGCCGAAGATGGTGGGAGCTCACGAAATAAAATAAATTTTGCTGCAAGACTACAACAATTTCAGCAAATGCAGCACAAGCATCGGGTGCTTGCCAAAACACAGGCAAAGTCACGCAATATTTCCCCTTCATCGTCAAAGGAGGCACAAAGAGAAGAAGAACCAAGAAGACCCCAGTCTGTCGAACGTAATGTTCCTCCTTCAAGATCATCAAAGAGAAGTCCAGGGAAGCTACAGTTATAA 2166 0.4127 MAESVIPAAVLRNLADKLYEKRKNAALEVEGIVKQLASSGDHDRIIAVINLLTNEFTYSPQANHRKGGLISLAAATVGLTTEAAQHLELIVPPVLNSFADQDSRVRYYACEALYNIAKVVRGDFIIFFNQIFDALCKLSADSDANVQSAAHLLDRLVKDIVTESDQFSIEEFIPLLRERMNVLNPYVRQFLVGWITVLDSVPDIDMLGFLPDFLDGLFNMLSDSSHEIRQQADSALSEFLQEIKNSPSVDYGRMAEILVQRAGSPDEFTRLTAMTWINEFVKLGGDQLVPYYADILGAILPCISDKEDKIRVVARETNEELRAIKADPTEAFDVGAILSIARRQLSNEWEATRIEALHWISTLLSRHRSEVLIFLNDIFDTLLKALSDSSDEVVLLVLDVHACIAKDPLHFRQLVVFLVHNFQLDNSLLEKRGALIIRRLCVLLNAERVYRELSTILEGESDLDFASIMVQALNLILLTSSELSEIRDLLKQSLVTPAGKDLYDSLYASWCHSPMAIISLCFLAQTYQHASAVIQSLVEEDINVKFLVQLDRLIRLMETPIFAYLRLQLLEPGRYIWLFKALYGLLMLLPQQSAAFKILKTRLKAVPSYSFNGEQLKRMPSGDPYQFHNVPDGFRTIEDGVVAEDGGSSRNKINFAARLQQFQQMQHKHRVLAKTQAKSRNISPSSSKEAQREEEPRRPQSVERNVPPSRSSKRSPGKLQL* 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0199 721 PANTHER PROTEIN VAC14 HOMOLOG 2 691 - -
Pvu3g0199 721 Gene3D - 245 409 IPR011989 -
Pvu3g0199 721 ProSiteProfiles HEAT repeat profile. 90 125 IPR021133 -
Pvu3g0199 721 MobiDBLite consensus disorder prediction 673 721 - -
Pvu3g0199 721 Gene3D - 2 244 IPR011989 -
Pvu3g0199 721 MobiDBLite consensus disorder prediction 704 721 - -
Pvu3g0199 721 SUPERFAMILY ARM repeat 8 540 IPR016024 -
Pvu3g0199 721 Pfam Vacuolar 14 Fab1-binding region 63 159 - -
Pvu3g0199 721 MobiDBLite consensus disorder prediction 687 701 - -
Pvu3g0199 721 Pfam Vacuolar protein 14 C-terminal Fig4p binding 427 606 IPR021841 -
Pvu3g0199 721 PANTHER TAX1 BINDING PROTEIN-RELATED 2 691 IPR026825 GO:0006661|GO:0070772
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0199 Pvu-Chr3 1713614 1729571 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g0199 3 1713614 1729571 Pvu3g0199 3 1713614 1729571 ECH