Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0187 ATGGCGATTGAAACGCTAGTGTTAGGTGCTGGTCAAGAAGTTGGGAAGAGCTGCGTGTTGGTAACCATCAACGGCAAGCGAATCATGTTCGATTGTGGAATGCATATGGGCTTCTTGGATCATCGTCGTTACCCTGATTTCACCCTTGTTGACCCTAATCAAGATTTCAACTCTGCCATCACTTGCATCATCATCACTCACTTTCATTTGGATCATGTTGGCGCTTTAGCTTACTTCACTGAAGTTTGTGGGTATAGTGGACCAATTTACATGACGTACCCAACAAAAGCTTTGGCTCCTTTGATGTTGGAAGACTATCGGAAAGTGATGGTTGATCGACGGGGTGAGGAGGAGCTATTCTCTTCCAATCAAATTGCTGAGTGCATGAAGAAGGTTACTGCTGTTGATTTGAGGCAGACTGTACAAGTAGATGAAGACTTGCAGATACGGGCTTATTATGCAGGACATGTTATTGGAGCTGCAATGTTCTATGCAAAAGTAGGGGATGCAGAAATGGTTTATACCGGAGACTACAATATGACACCAGATAGACACCTTGGAGCAGCTCAAATTGATCGACTACGGCTGGACCTTCTAATAACCGAATCCACATATGCTACTACAATTCGTGATTCAAGATATGCTCGAGAGAGGGAATTCCTCAAAGCTGTTCATAAATGTGTATCATGTGGAGGCAAGGTGCTTATTCCAACATTTGCTCTTGGAAGAGCTCAGGAACTATGTATTTTGTTGGAGGACTACTGGGAACGCATGAATTTGAAGGTTCCTATCTACTTCTCAGCAGGTTTAACAATCCAGGCCAATGCATATTATAAAATGCTTATTAGTTGGACAAGCCAGAAGATTAAAGATACATACTCTAAACATAATGCTTTCGATTTTAAAAATGTTCAAAAATTTGAAAAGTCTATGATAGATGCTCCTGGTCCTTGTGTTCTTTTCGCCACTCCCGGGATGATAAGCGGTGGATTTTCACTTGAAGTTTTTAAGCACTGGGCAGTGTCAGAAAATAACCTTGTCACTTTGCCTGGGTATTGTGTGGCTGGAACGATAGGTCATAAATTAATGTCAGATAAGCGGGGAAAAGTTGATCTGGATGCTAATACAAGAATAGATGTGCGATGCCAGGTTCATCAATTAGCTTTTAGTCCTCATACTGATTCTAAAGGGATAATGGATCTTGTAAATTTTCTCGCCCCCAAGCATGTTATACTCGTGCATGGGGAGAAGCATAAGATGGCATCCCTTAAAGAAAAAATTCATTCTGAATTTGGGATTCAATGTTATGATCCTGCAAACAATGAAACCATATGCATTCCTTCAACTCACTATGTAAATGCAGAAGCCTCAGACACTTTCATTCGAAGCTGCTTGAGTCCGAACTTCACATTTCAGAAATGCAATTCGGCGGACATATATAACTCTACTACGCCAGATAAAAATTTAATGCCTATGCTCCAAGTTGAAGATGAAAGGGTATCAGAAGGAGTTTTGGTCGTGGAGAAGGGAAAAAAGGCAAAGATTGTACACCAGGATGAACTTTTGCTTATGTTGGAGGAACAGAAGCACGATACGTTGAGCGGAACGTTCTGA 1614 0.4133 MAIETLVLGAGQEVGKSCVLVTINGKRIMFDCGMHMGFLDHRRYPDFTLVDPNQDFNSAITCIIITHFHLDHVGALAYFTEVCGYSGPIYMTYPTKALAPLMLEDYRKVMVDRRGEEELFSSNQIAECMKKVTAVDLRQTVQVDEDLQIRAYYAGHVIGAAMFYAKVGDAEMVYTGDYNMTPDRHLGAAQIDRLRLDLLITESTYATTIRDSRYAREREFLKAVHKCVSCGGKVLIPTFALGRAQELCILLEDYWERMNLKVPIYFSAGLTIQANAYYKMLISWTSQKIKDTYSKHNAFDFKNVQKFEKSMIDAPGPCVLFATPGMISGGFSLEVFKHWAVSENNLVTLPGYCVAGTIGHKLMSDKRGKVDLDANTRIDVRCQVHQLAFSPHTDSKGIMDLVNFLAPKHVILVHGEKHKMASLKEKIHSEFGIQCYDPANNETICIPSTHYVNAEASDTFIRSCLSPNFTFQKCNSADIYNSTTPDKNLMPMLQVEDERVSEGVLVVEKGKKAKIVHQDELLLMLEEQKHDTLSGTF* 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0187 537 SMART Lactamase_B_5a 15 232 IPR001279 -
Pvu3g0187 537 Gene3D - 212 390 - -
Pvu3g0187 537 SMART Beta_Casp_2 244 362 IPR022712 -
Pvu3g0187 537 Pfam Zn-dependent metallo-hydrolase RNA specificity domain 378 436 IPR011108 -
Pvu3g0187 537 Pfam Metallo-beta-lactamase superfamily domain 20 191 IPR001279 -
Pvu3g0187 537 Gene3D - 8 427 IPR036866 -
Pvu3g0187 537 Pfam Beta-Casp domain 244 362 IPR022712 -
Pvu3g0187 537 PANTHER INTEGRATOR COMPLEX SUBUNIT 11 1 531 - -
Pvu3g0187 537 SUPERFAMILY Metallo-hydrolase/oxidoreductase 6 447 IPR036866 -
Pvu3g0187 537 CDD INTS11-like_MBL-fold 6 203 IPR041897 -
Pvu3g0187 537 PANTHER CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR FAMILY MEMBER 1 531 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0187 Pvu-Chr3 1613340 1625760 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g0187 3 1613340 1625760 Pvu3g0187 3 1613340 1625760 ECH