Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0185 ATGGCGACCATGACGAGCTTGATCGGTCTCATCAACAAGATCCAACGCGCTTGCACGGTGCTCGGCGACCACGGCGGCGAGGGGATGTCCCTGTGGGAGGCGCTTCCGACCGTCGCGGTGGTTGGAGGACAGAGTTCAGGGAAATCATCAGTGTTGGAAAGTGTTGTGGGAAGGGATTTTCTGCCACGTGGATCTGGTATTGTCACACGGAGGCCACTAGTGCTGCAACTTCACAAGACAGAAGAGGGGAAACAGGAATATGCTGAGTTTCTTCATCAATCAAGGAAGAGATTCTCTGACTTTGCTGCTGTGAGACAAGAAATTTCAGATGAAACAGATCGTATAACTGGGAAGACAAAGGCAATTTCAAACGTTCCAATTCAACTGAGCATATATTCTCCCCATGTTGTGAACTTAACCCTCATCGACCTTCCTGGGTTGACAAAAGTTGCTGTAGAGGGACAATCAGACACTATTGTTCAAGATATTGAGAACATGGTCCGTTCTTATATTGAGAAGCCCAATTGCATTATATTGGCCATCTCTCCTGCAAATCAAGATATTGCCACTTCAGATGCAATAAAAATTGCAAGGGAAGTTGATCCTTCTGGTGAAAGGACATTTGGGGTGTTGACAAAACTTGATCTTATGGATAAAGGAACTAATGCAGTTGAGGTTCTCGAAGGAAGACAATACAGGTTGCAGCATCCTTGGGTTGGAATTGTCAATCGTTCACAGGCTGATATTAATAAAAACGTTGACATGATTGTTGCTCGCAAGAAGGAGCGTGAATATTTCGAGACTAGTCCCGAGTATGGACATTTGGCACATAAAATGGGGGCAGAATATCTGGCCAGACTTCTATCCCAACATTTGGAATATGTTATTAGGCAGAAGATACCCAGTATCATTGCCTTAATAAATAAAGCCATTGACGAGCTTAATGCAGAGTTAGACCGAATTGGCAGGCCAATAGCTGTGGATTCAGGGGCAAAGTTATACACAATTTTACAGATGTGTCGAGCATTTGATAAAGTATTTAAAGAACACCTGGATGGAGGCCGTCCTGGTGGGGACCGGATATATGGTGTTTTTGACAACCAATTACCAGCTGCTTTAAAAAAGCTCCCATTTAATCGTCATCTTTCCGTAAAGAATGTTGAAAGGGTAGTTACAGAAGCGGATGGTTATCAGCCACATCTAATTGCTCCAGAGCAAGGCTACAGAAGACTTATTGAGGGATCTATTGGCTATTTCAAAGGCCCAGCTGAAGCCTCTGTGGATGCTGTCCACCTAATTCTGAAGGAGCTTGTACGGAAGTCAATTGCAGAAACTGAGGAATTGAAGAGGTTTCCCACCCTCCAAGCTGATATATCTGCTGCTGCAAACGAGGCTTTGGATCGATTCCGAGAAGAAAGTAGGAGGACTGTGATTCGCTTGGTGGATATGGAGTCTGGCTATCTAACAGTGGAATTTTTCCGGAAGATGCATCCTGAACCAGAAAAAAAATCAGATCCAAAGAACCCAAATCGGAGTGCTCCTAATCCCAATTTGGACAGTACAGATAGTCACCTCAGTAAAATTGGGTCAAATGTTAATGGTTATATCAACATGGTTTGTGATGGACTAAAACATTCTCTACCGAAAGCCGTGGTTCATTGTCAAGTTAGAGAGGCAAAGAGATCATTGCTAAACCAATTTTATGTTCAAGTCGGGAAAAGGGAGAAGGATCAATTGGGGGCCTTGTTGGATGAAGACCCTGCACTTATGGAAAAGAGATCACAACTAGCTAAAAGGCTTGAATTGTACAAGCAAGCTATGGATGATATTGATTCTGTGGCTTGGAAATAA 1851 0.436 MATMTSLIGLINKIQRACTVLGDHGGEGMSLWEALPTVAVVGGQSSGKSSVLESVVGRDFLPRGSGIVTRRPLVLQLHKTEEGKQEYAEFLHQSRKRFSDFAAVRQEISDETDRITGKTKAISNVPIQLSIYSPHVVNLTLIDLPGLTKVAVEGQSDTIVQDIENMVRSYIEKPNCIILAISPANQDIATSDAIKIAREVDPSGERTFGVLTKLDLMDKGTNAVEVLEGRQYRLQHPWVGIVNRSQADINKNVDMIVARKKEREYFETSPEYGHLAHKMGAEYLARLLSQHLEYVIRQKIPSIIALINKAIDELNAELDRIGRPIAVDSGAKLYTILQMCRAFDKVFKEHLDGGRPGGDRIYGVFDNQLPAALKKLPFNRHLSVKNVERVVTEADGYQPHLIAPEQGYRRLIEGSIGYFKGPAEASVDAVHLILKELVRKSIAETEELKRFPTLQADISAAANEALDRFREESRRTVIRLVDMESGYLTVEFFRKMHPEPEKKSDPKNPNRSAPNPNLDSTDSHLSKIGSNVNGYINMVCDGLKHSLPKAVVHCQVREAKRSLLNQFYVQVGKREKDQLGALLDEDPALMEKRSQLAKRLELYKQAMDDIDSVAWK* 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0185 616 MobiDBLite consensus disorder prediction 498 524 - -
Pvu3g0185 616 PANTHER BNAA09G45430D PROTEIN 4 616 - -
Pvu3g0185 616 Pfam Dynamin GTPase effector domain 522 613 IPR003130 GO:0003924|GO:0005525
Pvu3g0185 616 ProSitePatterns Dynamin-type guanine nucleotide-binding (G) domain signature. 61 70 IPR019762 -
Pvu3g0185 616 Gene3D - 4 310 IPR027417 -
Pvu3g0185 616 SMART dynamin_3 4 252 IPR001401 GO:0003924|GO:0005525
Pvu3g0185 616 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 6 309 IPR027417 -
Pvu3g0185 616 Gene3D Dynamin, middle domain 332 593 - -
Pvu3g0185 616 Pfam Dynamin family 38 213 IPR045063 -
Pvu3g0185 616 SMART GED_2 520 613 IPR003130 GO:0003924|GO:0005525
Pvu3g0185 616 PRINTS Dynamin signature 35 53 IPR022812 -
Pvu3g0185 616 PRINTS Dynamin signature 60 77 IPR022812 -
Pvu3g0185 616 PRINTS Dynamin signature 133 150 IPR022812 -
Pvu3g0185 616 PRINTS Dynamin signature 183 201 IPR022812 -
Pvu3g0185 616 PRINTS Dynamin signature 202 218 IPR022812 -
Pvu3g0185 616 PRINTS Dynamin signature 225 244 IPR022812 -
Pvu3g0185 616 Pfam Dynamin central region 222 489 IPR000375 -
Pvu3g0185 616 ProSiteProfiles GED domain profile. 525 616 IPR020850 -
Pvu3g0185 616 ProSiteProfiles Dynamin-type guanine nucleotide-binding (G) domain profile. 32 301 IPR030381 GO:0005525
Pvu3g0185 616 CDD DLP_1 35 301 IPR001401 GO:0003924|GO:0005525
Pvu3g0185 616 PANTHER DYNAMIN 4 616 IPR022812 -
Pvu3g0185 616 MobiDBLite consensus disorder prediction 509 524 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0185 Pvu-Chr3 1585864 1598544 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g0185 3 1585864 1598544 Pvu3g0185 3 1585864 1598544 ECH