Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0172 ATGGAACAACAAAGAGATTTGGCACTTACCCAGATGAGAAAATCCGTTGAGAAGCTTGGTTCTTCTGCAGAGGGGTATAGTGACCATACACTGATAAGGTTTTTGGTTGCTCGATCAATGGAAGTGGAAAAAGCAGCAAAGATGTTTGTGCAGTGGCAGAAGTGGAGGAGTGCCATGGTGCCTAATGGATTCATTTCAGATTCTGAAATTCCAGATGAACTTGAAGCAAGGAAGATCTTCTTGCAGGGCTTGTCTGGGGATAAATTCCCTATCATGATTGTTCAAACAAACAGACATTTTCCTGCCAAGGATCAGATTCAGTTCAAGAAATTTGTTACATATATGTTGGACAAGACAGTTGCAAGTGCTTTCAAAGGAAGGGAAGTAGGGAATGAGAAGTTGATTGGGATTATTGATCTGCAAAATATTTCATATAAAAATATTGATGCACGTGGGTTGATCACAGGATTTCAATTTTTACAGAATTACTACCCTGAACGTTTGGCAAAGTGCTATATTTTACACATGCCATGGTTTTTTGTGAGTGTTTGGAAACTAGTTTCTCGTTTCCTAGAGAAGGCTACCTTAGAAAAGATTGTAATAGTGACGAATGAGGATGAGAGAAGAGAGTTCATAAGAGAGGTTGGTGAAGAAGTTCTCCCAGAACTATATGGTGGAAAAGCCAAGCTTGTAGCTATCCAAGATGTTGAATTGCCACCACTGCAAAATGGATCAATAAACTGA 744 0.3938 MEQQRDLALTQMRKSVEKLGSSAEGYSDHTLIRFLVARSMEVEKAAKMFVQWQKWRSAMVPNGFISDSEIPDELEARKIFLQGLSGDKFPIMIVQTNRHFPAKDQIQFKKFVTYMLDKTVASAFKGREVGNEKLIGIIDLQNISYKNIDARGLITGFQFLQNYYPERLAKCYILHMPWFFVSVWKLVSRFLEKATLEKIVIVTNEDERREFIREVGEEVLPELYGGKAKLVAIQDVELPPLQNGSIN* 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0172 247 CDD SEC14 71 227 IPR001251 -
Pvu3g0172 247 PANTHER OS03G0850700 PROTEIN 1 239 - -
Pvu3g0172 247 SMART sec14_4 73 229 IPR001251 -
Pvu3g0172 247 Gene3D - 1 237 IPR036865 -
Pvu3g0172 247 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 67 232 IPR001251 -
Pvu3g0172 247 SUPERFAMILY CRAL/TRIO domain 68 229 IPR036865 -
Pvu3g0172 247 SMART CRAL_TRIO_N_2 27 52 IPR011074 -
Pvu3g0172 247 SUPERFAMILY CRAL/TRIO N-terminal domain 3 65 IPR036273 -
Pvu3g0172 247 Pfam CRAL/TRIO domain 80 226 IPR001251 -
Pvu3g0172 247 PANTHER SEC14 CYTOSOLIC FACTOR-LIKE 1 239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0172 Pvu-Chr3 1527165 1534219 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g0172 24 223 Acyl Lipid Metabolism Gene Families AT1G55840 22.581 6.33e-14 68.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g0172 3 1527165 1534219 Pvu3g0172 3 1527165 1534219 ECH