Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0171 ATGTGGAAGACAATTCAAATGCATGGATTCCCAGCTACAGTGTCAGCTGAAGAGGTGAGGAAATTTTTGGAACAAAACACAGGCCCTCAAACTGTTCATGCTGTGGAGATTGAGCAGCTCAAAGAAGGAGATCCTACCACACATGTTAATGTTAAATTTACAGACAAAAAAAGTGTTGAAACAATCTTGCTCTTAGTTACTCAAAACCTATCATATGGTGACCATGTTCTAAATGCTACAGAAATAAAACATGACATTTTGCCAAAGCAGAGAAACTTTTCTCACAGCCTAGATGACATAGCAGTGCACTTTGGATGTCAAACATCCAAGAACAAACTTAGTGTACTCTGGGAACATCAAAGTGCTTCAGTCAAATTCGGGTTCAGACTGAGAAAGATGTTTATATTTTTCCATTATTTGTCAGTGGATTATAAGCTGCAGATTTCTTCTGAGAGTATGTCACGTATTGAGCTGCATCACTCAGATGATTTGACCAAGAAGCTCCTCCTTTTTCAGTTATGCAACGCTCCTCTGATCTATGAGAAAGATGTTTCCAAAAGCAAATATTTTAAGGAGGCTTGTGACAACAACCATTGGTTTCGAGGAGTAGATTTCACCCCATCATGCAGCATCGGACAATCTCCTACTTTATGTATTGAGCTTCCAAAAAGTGTTGAAGTTCCAAAGTTCAACCAGCACTATCGTAATTATACTGAAGTTGATGACAGTGTCTTCACTCTTGACAGACACATTGGTTTCTCTTCTAACTTCAATTTTGTTCCCATAGTGAACCCTCCACAAGGCTTCAACTTACCATACAAAATTTTGTTCAAAATCAACTCACTAGTTCAGTGTGGATGTCTTCCTCTGTTGGCAATTGACATCAATTTTTTTCAACTGGTTGACCCTGGAAAAGTAAAGCTTGAATACATAGAAAGTGCCCTGCATAAATTAGATCAACTAAAAGTGTGCTGCTATGAACCTGCACAATGGTTGGAGAAACAATATAAGAAATACTCAGAAAATGGTCTACTTCCAGTATCTAGTGCTATTTCATTGGATGATGGGTTGGTCTATGTGCATAGAGTGCAAGTAACTCCATCCAAAATATATTTCTGTGGTCCTGAAGTGAACCTTTCTAATCGTGTCTTGAGAAACTATCCTGAAGACACTGATAACTTTCTTCGTGTTTCTTTTGTTGATGAAGACATGGAAAAACTACACTCAGCAGATTTGGTGCCAAGTTCATCTTCTGTGAGCATGGACAGAGAAACAAAGCTTCATGAGAGGGTACTTGCAACACTTAAAAATGGCATAGAAATTGGTGATAAGAAGTTTGAGTTTCTTGCCTTCTCACCAAGTCAGTTGAGGGATAACTCTGTGTGGATGGTTGCATCAAGAACTGGACTTACTGCATCTGATATAAGAAACTGGATGGGAGAGTTTCATGAAATCAGAAATGTGGCCAAGTATGCAGCAAGGCTTGGTCAATCATTCAGCTCTTCCAGGGAAACAGTGAGAGTTGAAAGACATGAAGTGAAAATTATTCCTGATATAGAATTCAGAAGAGGTGAAAACAAATACTGTTTCTCTGATGGAATTGGGAAGATATCTTATGAATTGGCTCAAGAAGTGGCTAAGAAATGTGGTTGTAGGGATACTCCTTCTGCATTTCAAATCAGATATGGAGGGTACAAAGGTGTTGTTGCTGTTGATCCTACCTCATCAACTAAACTGTCCTTAAGAAAGAGCATGTGCAAGTACAAGTCAGAAAACACAAATTTGGATGTTTTGGCATGGAGCAAATACAAACCTTGTTACCTTAATCGTCAAATAATCACCCTTTTGTCCACACTCGGGGTTCAGGATCAAGTCTTCAGAAAGAAACAAAGGGAAGTTCTTAATCAACTTAAAATGTTGTCAAGAAATCCGTTGATGGTATTAGATTATATGTCCACAGGAGAGATTGCAAAGGTTTTGAAGGAAATGCTCATTTGTGGCTTTCATCCAAATAAGGAACCATTTGTTTCCATGATGTTGCAAACATTATATGCATCAAAACTACAGGAACTGCAGCTCAAAACTAGGATACTTGTTAAGAGAGGAAGAGCATTGTTAGGATGCTTGGATGAAACTAGGACTCTAAAATATGGAGAGGTGTTTGTGCAGATAGCTCACCAAAGAAATAAGCAATTTCTTGCTATGTCCTCTCTTTCTTCTAACAGATATGCATCAAACAAAAGCAAACATATTGTTAAGGGAAAGGTAATTGTAGCCAAAAATCCCTGTCTACACCCGGGAGATGTTCGAGTTTTAAGAGCAGTGGATGTACCTTCTCTGCATCATATGGTGGACTGTGTTGTTTTTCCACAGAAGGGGAGAAGACCACATCCCAATGAATGTTCAGGAAGTGACTTGGATGGAGATATCTACTTTGTCAGCTGGGACCCTGATCTTATTCCTCCTCGTCAGGAAAATCCCATGGATCATGCACCATCTCCAGTTGTGAATGTGGATCATGATGTTACATTACAGGAAGTTCAGGAGTATTTTGCTCACTACATAGTTAAAGACAAGTTGGGCATTGTTGCAAGTGCACACACGGTGTTTGCTGATAAGGATCCTCAAAAAGCTATGAGCCCTGCATGCATTGAGCTTGCAAAGCTACACTCAGTTGCTGTTGATTTTGCAAAATCTGGTGTGCCAGCAGAAGTTCCACAACATCTACGCGTGGAAGAGTATCCAGATTTCATGGAAAAGCCAGATAAACCAAGTTACCAATCAAATAGCATAATAGGAAAGCTTTATCGTGAGGTGAAGAATGTTGCACAACACAAGAGTCTCACCAAACCCTTCACAAGAAGAGTGGCAAGGCAATCATACGACAGTGACATGGAGATTGAAGGCTTTGAGAAGTACACAGCAAGTGCTTGTGAATACAAGAACATGTATGACTTCAAGCTGGGGAACCTAATGGATTACTATGGTATAGAAACAGAAGCAGAAATAATGAGTGGCAATATCTTGAAAATGTCAAAAACCTTCAGAGAAAGAAAGGACTTGGAAGGAGTTAATCATGCTGTGATGTCTCTAAGAAAGGAAGCTAGAAGCTGGTTCAATGTGATGATAAAAAACAAGTCAAATTCTGAAGTTGATGATGGTGATGTTGCCTATGCAATAGCATCAGCTTGGTACCATGTTACATATCATCCTAGGTACTGGGGGTCCTACAATGAAGGGCTAAAGAGGGATCATTTTCTCAGCTTCCCATGGTGTGTGCATGACACTCTCATTCAGATAAAGAAGGAGAAAGTAAGACAGAGAACTTTTTCAATGGAGTTCTGGAGAATACTGAAACTCATTCCTCTGTTGCTGTTTTTCTTCCTATTGTGGATAATAGTACAATATCTAAGGAGTTGA 3420 0.3933 MWKTIQMHGFPATVSAEEVRKFLEQNTGPQTVHAVEIEQLKEGDPTTHVNVKFTDKKSVETILLLVTQNLSYGDHVLNATEIKHDILPKQRNFSHSLDDIAVHFGCQTSKNKLSVLWEHQSASVKFGFRLRKMFIFFHYLSVDYKLQISSESMSRIELHHSDDLTKKLLLFQLCNAPLIYEKDVSKSKYFKEACDNNHWFRGVDFTPSCSIGQSPTLCIELPKSVEVPKFNQHYRNYTEVDDSVFTLDRHIGFSSNFNFVPIVNPPQGFNLPYKILFKINSLVQCGCLPLLAIDINFFQLVDPGKVKLEYIESALHKLDQLKVCCYEPAQWLEKQYKKYSENGLLPVSSAISLDDGLVYVHRVQVTPSKIYFCGPEVNLSNRVLRNYPEDTDNFLRVSFVDEDMEKLHSADLVPSSSSVSMDRETKLHERVLATLKNGIEIGDKKFEFLAFSPSQLRDNSVWMVASRTGLTASDIRNWMGEFHEIRNVAKYAARLGQSFSSSRETVRVERHEVKIIPDIEFRRGENKYCFSDGIGKISYELAQEVAKKCGCRDTPSAFQIRYGGYKGVVAVDPTSSTKLSLRKSMCKYKSENTNLDVLAWSKYKPCYLNRQIITLLSTLGVQDQVFRKKQREVLNQLKMLSRNPLMVLDYMSTGEIAKVLKEMLICGFHPNKEPFVSMMLQTLYASKLQELQLKTRILVKRGRALLGCLDETRTLKYGEVFVQIAHQRNKQFLAMSSLSSNRYASNKSKHIVKGKVIVAKNPCLHPGDVRVLRAVDVPSLHHMVDCVVFPQKGRRPHPNECSGSDLDGDIYFVSWDPDLIPPRQENPMDHAPSPVVNVDHDVTLQEVQEYFAHYIVKDKLGIVASAHTVFADKDPQKAMSPACIELAKLHSVAVDFAKSGVPAEVPQHLRVEEYPDFMEKPDKPSYQSNSIIGKLYREVKNVAQHKSLTKPFTRRVARQSYDSDMEIEGFEKYTASACEYKNMYDFKLGNLMDYYGIETEAEIMSGNILKMSKTFRERKDLEGVNHAVMSLRKEARSWFNVMIKNKSNSEVDDGDVAYAIASAWYHVTYHPRYWGSYNEGLKRDHFLSFPWCVHDTLIQIKKEKVRQRTFSMEFWRILKLIPLLLFFFLLWIIVQYLRS* 1140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0171 1139 Pfam RNA dependent RNA polymerase 365 939 IPR007855 GO:0003968
Pvu3g0171 1139 PANTHER RNA-DEPENDENT RNA POLYMERASE 3 1131 IPR007855 GO:0003968
Pvu3g0171 1139 PANTHER RNA-DEPENDENT RNA POLYMERASE 3 1131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0171 Pvu-Chr3 1516886 1524476 Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g0171 3 1516886 1524476 Pvu3g0171 3 1516886 1524476 ECH