Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0166 ATGGTGTCAAAATCCTATTCAAACCTATTGGAGTTGGCCTCTGGAGAGGCTCCTTCATTTGGTTACATGAACAGGAGAATTCCAAGAATTATGACCGTGGCTGGGTTGATATCAGATGTTGATGACGACCCAGTAGACAGTGTGTGCTCTGATCCGTCTTCATCTTCGGCTCACCGTGACCGGATAATCATGGTGGCTAATCAGCTTCCTATAAGGGCTCAGAGGAGGCCAGATGGGAATAGGAGTTGTTGGTGTTTTGAGTGGGATGAGAATGCCCTTCTTCAGCTGAAAGATGGGTTAGGGGATGATGATATAGAGGTTATTTACGTTGGATGTCTTAAGGAGGAGGTGCATCCAAGTGAACAAGATGAGGTTTCACAGACACTTCTTGAGACCTTCAAGTGTGTCCCAACTTTTCTTCCAGCTGACCAGTTTACCAAGTTCTACCATGGCTTCTGCAAGCAGCAGTTGTGGCCACTGTTTCATTACATGTTGCCCTTGTCACCAGAACTTGGTGGGAGGTTCAACAGGTCACTGTGGCAAGCTTATGTGTCAGTGAATAAAATTTTTGCAGATAGGATCATGGAAGTTATCAACCCTGAAGATGATTATGTGTGGATACATGATTATCATCTGATGGTGTTACCAACTTTCTTGAGGAAGAGGTTCAACAGGGTGAAATTGGGGTTCTTCCTTCACAGCCCGTTCCCTTCATCAGAGATATATAAAACATTGCCTGTTAGGGAGGAGATCTTGAGAGCCCTTCTCAATTCGGATTTGATAGGCTTCCACACTTTTGATTATGCGCGCCATTTCCTCTCCTGTTGCAGCCGGATGCTAGGCCTTACCTACGAATCAAAGAGAGGTTATATTGGGATTGAGTACTATGGAAGAACTGTTAGTATCAAGATTCTTCCTGTTGGTATTCATCTGGGTCAGCTTCAATCTGTTTTGAGGATGCCTCAGACTGAAGAAAAAGTTTGTGAGCTCATCAAACAGTTTTCTGATAAAGGAAGAACACTGTTGCTTGGGGTGGATGACATGGATATTTTCAAGGGAATAAGTTTGAAGCTATTGGCCATGGAGCAGCTTCTCATTCAGCACCCTGATTGTCAGGGAAAGGTGGTGCTAGTCCAGATAGCCAATCCTGCTAGAGGCCGGGGGAAGGATGTGAAAGAAGTGCAAGCAGAGACAAAGGCCACAGTGAAACGGATCAATGAAACATTTGGGAAACCCGGGTATGATCCCGTGATTCTGATAGACGAGCCTCTCAAGTTTTATGAGAGAGTTGCTTACTATGTTGTTGCAGAGTGTTGTTTAGTCACTGCCGTAAGGGATGGAATGAATCTCATACCCTATGAATATATCATCAGTCGTCAAGGAAATGAAATGTTGGACAAAGTTTTGGGTCTAGCTTCATCTCCCAAGAAAAAAAGCATGTTGGTTGTGTCTGAATTCATTGGCTGTTCCCCATCTTTAAGTGGAGCAATCAGAGTGAACCCGTGGAATATCGATGCAGTAGCCGATGCAATGGACTCTGCTCTGGAAATGGCTGATTCTGAGAAGGAGCTTAGGCATGAAAAGCATTATAGATATGTTAGTACTCATGATGTTGGGTACTGGGCTCGAAGCTTCTTGCAAGATTTGGAAAGGACTTGCAGTGATCATGTGAGAAGAAGGTGGTGGGGGATTGGGTTTGGATTAAGCTTTAGAGTTGTTGCACTTGATCCAAACTTCAAGAAGCTTTCAATGGAGCACATAGTTTCAGCATACAAACGGACAACAACTAGAGCAATCCTTCTTGACTATGATGGTACACTGATGCCTCAATCATCCACAATTGATAAGAGTCCAAGCAGTAAATCCATTGAAATTCTTAGTAGTTTGTGTAGAGATAAGAACAACGTGGTTTTCCTTGTTAGTGCTAGAAGCCGCAAGATGCTTTCAGAATGGTTTTCTTCTTGTGAGAATCTGGGAGTTGCAGCTGAGCACGGGTACTTTCTAAGAATGAAGCGAGATGAAGAGTGGGAAACACATGTTGCCGCAACAGACTGTAGTTGGAAACAAATTGCAGAACCTGTAATGAAACTTTATACCGAAACAACTGATGGATCCACCATTGAAGACAAGGAGACTGCACTTGTTTGGTGCTATGAGGATGCAGATCCAGACTTTGGATCATGCCAAGCTAAGGAACTTCTTGATCACCTTGAGAGTGTGCTTGCAAATGAACCAGTAACAGTCAAGAGTGGGCAGAATAATGTAGAGGTTAAACCACAGGGTGTGAGCAAGGGACTAGTGGCCAAACGCCTACTTTCTGCCATGCAAGAAAAAGGAATGTGCCCTGATTTTGTTTTGTGCATAGGAGATGACAGGTCTGATGAAGACATGTTTGAGGTGATCACCAGCTCAATGGGCGGGCCAATCGCTCCGCGAGCCGAGGTTTTTGCCTGCACCGTTTGTCGAAAACCCAGTAAGGCTAAGTACTATCTGGATGATACCACTGAAATAGTGAGATTGCTCCAAGGCTTAGCCTGTGTTTCAGAGCAAATAGTTTCATTTTCTTCAGAGCAAATAGTTTGTTAA 2586 0.4401 MVSKSYSNLLELASGEAPSFGYMNRRIPRIMTVAGLISDVDDDPVDSVCSDPSSSSAHRDRIIMVANQLPIRAQRRPDGNRSCWCFEWDENALLQLKDGLGDDDIEVIYVGCLKEEVHPSEQDEVSQTLLETFKCVPTFLPADQFTKFYHGFCKQQLWPLFHYMLPLSPELGGRFNRSLWQAYVSVNKIFADRIMEVINPEDDYVWIHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPVREEILRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGIEYYGRTVSIKILPVGIHLGQLQSVLRMPQTEEKVCELIKQFSDKGRTLLLGVDDMDIFKGISLKLLAMEQLLIQHPDCQGKVVLVQIANPARGRGKDVKEVQAETKATVKRINETFGKPGYDPVILIDEPLKFYERVAYYVVAECCLVTAVRDGMNLIPYEYIISRQGNEMLDKVLGLASSPKKKSMLVVSEFIGCSPSLSGAIRVNPWNIDAVADAMDSALEMADSEKELRHEKHYRYVSTHDVGYWARSFLQDLERTCSDHVRRRWWGIGFGLSFRVVALDPNFKKLSMEHIVSAYKRTTTRAILLDYDGTLMPQSSTIDKSPSSKSIEILSSLCRDKNNVVFLVSARSRKMLSEWFSSCENLGVAAEHGYFLRMKRDEEWETHVAATDCSWKQIAEPVMKLYTETTDGSTIEDKETALVWCYEDADPDFGSCQAKELLDHLESVLANEPVTVKSGQNNVEVKPQGVSKGLVAKRLLSAMQEKGMCPDFVLCIGDDRSDEDMFEVITSSMGGPIAPRAEVFACTVCRKPSKAKYYLDDTTEIVRLLQGLACVSEQIVSFSSEQIVC* 862
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0166 861 Pfam Glycosyltransferase family 20 61 550 IPR001830 GO:0003824|GO:0005992
Pvu3g0166 861 SUPERFAMILY HAD-like 597 845 IPR036412 -
Pvu3g0166 861 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 1 851 IPR001830 GO:0003824|GO:0005992
Pvu3g0166 861 Gene3D Glycogen Phosphorylase B; 316 534 - -
Pvu3g0166 861 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 60 553 - -
Pvu3g0166 861 Gene3D - 727 856 IPR023214 -
Pvu3g0166 861 Gene3D - 596 726 IPR023214 -
Pvu3g0166 861 Pfam Trehalose-phosphatase 600 834 IPR003337 GO:0003824|GO:0005992
Pvu3g0166 861 Gene3D Glycogen Phosphorylase B; 53 315 - -
Pvu3g0166 861 TIGRFAM T6PP: trehalose-phosphatase 596 844 IPR003337 GO:0003824|GO:0005992
Pvu3g0166 861 CDD GT20_TPS 61 550 IPR001830 GO:0003824|GO:0005992
Pvu3g0166 861 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 599 801 IPR006379 -
Pvu3g0166 861 PANTHER ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE [UDP-FORMING] 6 1 851 - -
Pvu3g0166 861 CDD HAD_TPP 598 839 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0166 Pvu-Chr3 1479494 1483979 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g0166 1 852 Trehalose Biosynthesis Gene Families AT1G68020 80.831 0.0 1451
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g0166 3 1479494 1483979 Pvu3g0166 3 1479494 1483979 ECH