Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0165 ATGGAAGCTACACAAATTGCAGAAAAGGGAACTGAAACCATTGCTTCTCCCAAACAAAATGAAGAACTCCTCAAGAACATCATTGCAACTCATCCTTTGTATCAACTCTTGATTCAATCTCACATCAACTGCTTCAAGGTGGGATTAAGTGAAGGTGAAGAGTTTGATGCAACAAGTGGTGAAGCATTGAAGAAGGTGGTGAATTCAAAGTCCAAAGCAGCTCCTACTCCAAACACTTCTGAGTTGGATCACTTCATGGAAGCTTATTGCATGGCACTGAGCAAGCTGAAGGAAGCCATTGAAGAACCAACAAAAGAAACCAATGCTTTTATCAGAGCTACGTATCATGAACTAAAGCAACTAGATGAAGTGAATCAGCCATAA 384 0.4036 MEATQIAEKGTETIASPKQNEELLKNIIATHPLYQLLIQSHINCFKVGLSEGEEFDATSGEALKKVVNSKSKAAPTPNTSELDHFMEAYCMALSKLKEAIEEPTKETNAFIRATYHELKQLDEVNQP* 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0165 127 Pfam KNOX2 domain 80 121 IPR005541 GO:0003677|GO:0005634
Pvu3g0165 127 SMART KNOX2_2 69 123 IPR005541 GO:0003677|GO:0005634
Pvu3g0165 127 Pfam KNOX1 domain 24 48 IPR005540 GO:0003677|GO:0005634
Pvu3g0165 127 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 12 121 - -
Pvu3g0165 127 SMART KNOX1_2 22 64 IPR005540 GO:0003677|GO:0005634
Pvu3g0165 127 PANTHER FUSED COMPOUND LEAF 1 12 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0165 Pvu-Chr3 1467462 1468857 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g0165 22 121 Homeobox Transcription Factor Family AT4G08150 31.373 2.42e-10 54.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g0165 3 1467462 1468857 Pvu3g0165 3 1467462 1468857 ECH