Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0164 ATGATAACCAGATCGAGAAAATTGAAGCGCAAGCTCGAACCGGAGCCACTTCCACTCATCGTCACCAAGAAGCTCCGGCAGAAGCTGCCTCGCCGGCCAAGGCAGAACTTCTCGCCGGTGCTTCTCGTCAGAAACTCTGGAATGAATCCTCGTTTCTCCATGGATTCCAGCTCCGGCTCCGACTTCGCTGCAGGTGAAGCTTCTTGCAACTCCAGCAGAGCTTCCATCGCCGGCAAGGGAAACGCGAACTCGAGAAATGAATCGTCGATCGATTCAAGTAGAAATCAGAGGTTAGAGAAGCGAAACGAGAACGAAGTGGAGGTGTCGGAGTCTTCGTGCGCGGACTCCAATTCGTTCGCTCGAGAACGAGGCAGAAGCTCAATTCTGAAGTTCAAAAGCGGAAGAGAATTTAAGAATCTGAGAGGAGAAGACGACGTTTCGAAAGTGTGCCTGAAATCGGATACTACTGCTGCTCTGAAGTTCAAAACCGTTAGAGAGAGTAAAAATGTAAAGGAACATGACGACGTTTCGTGCGGGAAATCAGTTATTACTTGCGAGGAACAGTTCAATTCGAAGTCCTCCAGTGACGGAAACGGAAACATGAAAATCTCTTCGGAGTCAAACGGAGACGTCGTGTCGTTTAGTTCCTTTGTTCGCGCGTCGTTTGAGGAGGAAAAGGATATCAGCAAGGAAAACAGAGCGTCGGAATGTGAATACTCTGAAGGTTCTAAAAACCTCCACGCGGAAGAGAATTGCGCGGATTTAATAGCGCAATCGATGACGAAGCAGGAATCCGAAAATGACGACCTCGCTGTCGACCTCACTTGCTCTGAGGATCTGTGTTTCTCGTATAGTGAAGACGATGACGAATCGGAATATTGTTCCAGTCAGGGAACCGTGTTCTCTGAATTTCATTCTGAGATTTTCGGTGAAAGCTCGCAGCAGGAGACTTCGGATTACTCTCCGTCGGTGTTCGCGGATTCTGGAAGCCAGTTTTCCGAGGGATCCGTCGGAGAAACTCCTTCGCCGACGTATTTGTTGTTCCTTCAGTATCGCAAGGAGTTCACGACTCTAGTTTCTACTTCTCCAGTGATAAACTCTTCTTCCAGCGACGAAGATGAAGCCAATTTTGTGAGATTCGAAGATTCTGATGACGAAGACAGCTACCAGATGCTGAGGAAGAGGGAGAGGAAGCAAGGTTTTGTGTCAAATTATGGTGAAAGATATTTCTCTACTACTGAATTCGGAGAGACCGTACTTGAGCAACGTTCACAAATGGTTCACTGGATCGTTGAGCAATCTTGTCGAAAACAGCTTCGGCAAGAGACTATTTTTCTTGGCGTCAACCTACTTGACCGTTTTCTGAGCAAAGGATACTTCAAAGCCGAAAAATACCTTCAAATTGTTGGAATAGCTTGCCTCACGTTAGCGATCAGGATCGAAGAAAATCAGCAACACAACAGAGTGGGGCAAATCAGTTTCAACATAGGAAGCAATAAGTACAGTAGAGGCGAGGTGGTAGCTATGGAATGGATGGTGCAGGAGGTGCTCCAGTTTCAGTGCTTTCTGCCTACCATCTACAATTTCTTGTGGTTTTACCTAAAAGCAGCCAATGCTGATGCAGTCGTTGAGAAGAGGGTCAGGTATCTGGCAGTGCTGACACTGTCATCTCATGAGCAACTGTGCTACTGGCCTTCAACAGTTGCTGCAGCACTTGTAGTCCTGGCTGGTCTTGAAGTCAATCAAAGTTCATCGCTCAGAGTAATTGGGATCCACGTTAGATCAAAAGATGAGAATTTGTACGAGTGCATAGAGAGCCTGGAGTGGCTGTTACGCTATATAGGATAA 1848 0.4702 MITRSRKLKRKLEPEPLPLIVTKKLRQKLPRRPRQNFSPVLLVRNSGMNPRFSMDSSSGSDFAAGEASCNSSRASIAGKGNANSRNESSIDSSRNQRLEKRNENEVEVSESSCADSNSFARERGRSSILKFKSGREFKNLRGEDDVSKVCLKSDTTAALKFKTVRESKNVKEHDDVSCGKSVITCEEQFNSKSSSDGNGNMKISSESNGDVVSFSSFVRASFEEEKDISKENRASECEYSEGSKNLHAEENCADLIAQSMTKQESENDDLAVDLTCSEDLCFSYSEDDDESEYCSSQGTVFSEFHSEIFGESSQQETSDYSPSVFADSGSQFSEGSVGETPSPTYLLFLQYRKEFTTLVSTSPVINSSSSDEDEANFVRFEDSDDEDSYQMLRKRERKQGFVSNYGERYFSTTEFGETVLEQRSQMVHWIVEQSCRKQLRQETIFLGVNLLDRFLSKGYFKAEKYLQIVGIACLTLAIRIEENQQHNRVGQISFNIGSNKYSRGEVVAMEWMVQEVLQFQCFLPTIYNFLWFYLKAANADAVVEKRVRYLAVLTLSSHEQLCYWPSTVAAALVVLAGLEVNQSSSLRVIGIHVRSKDENLYECIESLEWLLRYIG* 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0164 615 Pfam Cyclin, N-terminal domain 417 520 IPR006671 -
Pvu3g0164 615 CDD CYCLIN 423 513 IPR013763 -
Pvu3g0164 615 PIRSF Cyclin_A_B_D_E 257 612 IPR039361 -
Pvu3g0164 615 PIRSF Cyclin_A_B_D_E 54 257 IPR039361 -
Pvu3g0164 615 PANTHER CYCLINS 6 605 IPR039361 -
Pvu3g0164 615 MobiDBLite consensus disorder prediction 92 108 - -
Pvu3g0164 615 Gene3D - 414 517 - -
Pvu3g0164 615 ProSitePatterns Cyclins signature. 423 454 IPR006671 -
Pvu3g0164 615 PANTHER CYCLIN-SDS 6 605 - -
Pvu3g0164 615 MobiDBLite consensus disorder prediction 73 91 - -
Pvu3g0164 615 Gene3D - 518 614 - -
Pvu3g0164 615 SUPERFAMILY Cyclin-like 382 520 IPR036915 -
Pvu3g0164 615 CDD CYCLIN 523 589 IPR013763 -
Pvu3g0164 615 SUPERFAMILY Cyclin-like 524 611 IPR036915 -
Pvu3g0164 615 SMART cyclin_7 428 515 IPR013763 -
Pvu3g0164 615 Pfam Cyclin, C-terminal domain 524 608 IPR004367 -
Pvu3g0164 615 MobiDBLite consensus disorder prediction 73 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0164 Pvu-Chr3 1459839 1464914 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g0164 423 584 Core Cell Cycle Gene Families AT5G25380 37.725 1.42e-22 99.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g0164 3 1459839 1464914 Pvu3g0164 3 1459839 1464914 ECH