Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0163 ATGTCGGCCACTTTGGACCATGCTGGTCAAAGAGCTGAAGCTTTTCCACAATCCACAGCAATACCAAATTGGACTATTCATGTGTCAGACATAAGAACAGTTAAGGTTAGCAACATATCACTGGTTACTTCCAAGATGGAGATTCAAGAGTTCTTTTCATTCTCAGGTGATATTCGGTATATTGAGATGCAAAGGGAAAGTGACCGCACTCAGGTTGCTTATGTTACATTTAAGGATACACAGGGAGCAGACACAGCAGTTCTCTTAACAGGTTCAAAGATAGGTGATCTATATGTCACAATCACACCTGTAGAAAAGTATCAGCTGCCCCCTGATGCTGTTCCAGCAAGTCCGACAAACCAAAGTGCTGATGCAGTGAAGAAGGCAGAAGATGTAATGAGCACTATGCTTGCCAAGGGTTTCATTCTAGGAAAGGATGCTATCAACAAGGCAAAATCCTTTGATGAGCGCCACCAGTTGACCTCAAATGCCTCTTCCACAGTTGCTTCCATTGATCGCAGAATGGGATTCAGTGACAAACTGAGCATGGGAACAGCTATTGTGAATGGAAAGGTGAAAGAAATGGATGAAAAGTACCAGCTTTCTGAGATGACAAAGTCTGCAATTGCTGCAGCAGAGCAGAAGGCAAGCAGTGCCGGATCAGTTATCATGAGCAATTCTTATGTGTTGACTGGAGCTTCATGGGTGTCCAGTGCCTTTGGGGCCATAGCCAAGGCGGCCGGCGATGTCAGCACGATGACAAAGGAGAAGGTTGAGCAGGCGGAGGTGGAAAGGAACGAGATGATCTATAGTGAAAGGAAAGGGAGTGTTGATGAATTTGCAAAGAGAAACTTTGAGGATGCTTCAGACATGGGTCCTGCAATAGTTCCTATTAATTCATATGATGACCGAAAGCTGGAAATTATATAA 930 0.443 MSATLDHAGQRAEAFPQSTAIPNWTIHVSDIRTVKVSNISLVTSKMEIQEFFSFSGDIRYIEMQRESDRTQVAYVTFKDTQGADTAVLLTGSKIGDLYVTITPVEKYQLPPDAVPASPTNQSADAVKKAEDVMSTMLAKGFILGKDAINKAKSFDERHQLTSNASSTVASIDRRMGFSDKLSMGTAIVNGKVKEMDEKYQLSEMTKSAIAAAEQKASSAGSVIMSNSYVLTGASWVSSAFGAIAKAAGDVSTMTKEKVEQAEVERNEMIYSERKGSVDEFAKRNFEDASDMGPAIVPINSYDDRKLEII* 310
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0163 309 PANTHER SERINE/ARGININE-RICH SPLICING FACTOR 14 307 - -
Pvu3g0163 309 Gene3D - 28 102 IPR012677 -
Pvu3g0163 309 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 32 106 IPR000504 GO:0003723
Pvu3g0163 309 PANTHER RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN 14 307 - -
Pvu3g0163 309 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 35 96 IPR000504 GO:0003723
Pvu3g0163 309 SMART rrm1_1 33 102 IPR000504 GO:0003723
Pvu3g0163 309 SUPERFAMILY RNA-binding domain, RBD 21 108 IPR035979 GO:0003676
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Pvu3g0163 Pvu-Chr3 1455245 1459035 Dispersed
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g0163 3 1455245 1459035 Pvu3g0163 3 1455245 1459035 ECH