Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0158 ATGGGTCTTAGTTTGAAGATGCAGAGCCACCATCCTGTCGCTTTGAGGTTGTATGATCAAATGGGGTCTAAAAGAAAGTACACTTTCATTCAGGCTCATAGAGCTTGGCTTCCAAAGTTCTTGCTGCTATGGATCCTGCTAATGGCTTTGATCAGTTGGTGCATCTTTAGCAAAATGGATGATGACACTAAAGTCAGAAGGAAGGAGGTGTTGGGTAGCCTCTGTGATCAAAGGGCAAGAATGCTACAAGATCAGTTTAGTGTTAGTGTTAACCATGTCCATGCCCTTGCCATCCTCGTTTCAACCTTCCATTACTACAGATACCCTTCTGCCATTGACCAGGAAACCTTTGCCGAGTATACAGCCCGGACAGCATTTGAACGGCCATTACTGAGTGGTGTGGCATATGCACAAAGAGTTGTTAAATCTGAGAGGGAGAAATTTGAGAAAGAACATGGATGGGTTATAAAGACAATGGAAGAAAAGTCTTCACTGGTTAGAGATGAGTATGCCCCGGTGATATTTGCACAAGAAACTGTCTCATATCTTGAGTCTCTTGATATGATGTCTGGAGAGGAGGATCGAGAGAACATTTTAAGGGCTAGAGCCACTGGGAAAGCAGTTCTGACGAGCCCTTTCAGGCTGTGGGGTTCTCACCATCTTGGTGTGGTTTTAACATTTCCTGTGTACAAGTCCAAGCTCCCTCAGAAGACAACAGTGGAAGAACGCATCGAAGCAACTGCAGGATACGTTGGAGGATCCTTTGATGTTGAGTCCCTTGTTGAGAATTTACTTGGGCAACTTGCTGGTAACCAAGCAATTTTGGTGAATGTATATGATATCACAAACTATACTAATCCACTAATAATGTATGGCAAGCCCTATGAAGAAGGTGATGTGTCTCTTGCCCATGAAAGCAAGCTTGATTTTGGAGACCCTTATAGGAAACATCAAATGATATGTAGGTACCATCAGAAGGCACCTACAAATTGGATAGCTGTTACCACTGCATTTCTATTTTTTGTGATTCTTATATTAGTGGGTTACATTTTATACGGTGCTGGAAATCATATTGTCAAAGTCGAAGATGATTTCCATGAAATGCAGGAACTGAAAGTTCGAGCGGAATCAGCCCATGTTGCCAAGTCCCAGTTTCTAGCTACGGTCTCTCATGAAATTAGAACACCCATGAATGGTATCTTAGGAATGCTTGCTCTGCTTCTAGATACAGAATTGAGTTCAACCCAACGGGATTATGCTCAGACTGCTCAAGCATGCGGAAAGGCACTGATAACACTAATAAATGAGGTGCTGGACAGAGCTAAAATTGAAGCTGGCAAGTTAGAGCTGGAGGCTGTTCCATTTGATCTTCGTTCCATACTCGATGATGTTCTTTCCCTTTTTTCTGAGAAATCTAGACACAAAGGTTTAGAGCTGGCTGTCTTTGTTTCTGATAAAGTACCGGATATTGTCATGGGAGATCCCGGAAGATTCAGACAAATAATAACAAATCTTGTAGGCAACTCTGTTAAATTCACTGAACATGGACATATATTTGTCAAAGTCCATCTAGGGGACAATAGAAAGCCCACACTGAATGGAAAACATACAAATGGAGAATCAGATGAAGTTTTCCATATATCTGATGATTATCATTTCAAAACCTTAAGTGGACGTGAAGCAGCTGACGAACGGAATAGCTGGGATAATTTTAAGCACCTAATTGCTGATGAAAAATCTTGCCTTGATTCTTCAAGAGAAACGGTGGCTACTAGTGAAACTTCTGAGCAAGTCACCTTGAGGGTGTGTGTGGAAGACACAGGAATTGGAATTCCTTTTTCAGCACAGGATAGGATATTTATGCCTTTTGTGCAGGCTGACAGCTCAACTTCACGAAATTATGGGGGAACTGGTATTGGCTTGAGTATCAGCAAATGTCTGGTTGAACTAATGGGTGGTAAGATAAACTTCATAAGCCGACCCCAGATTGGTAGCACTTTCTCTTTTACAGCAGTTTGTGGAACCTTTAAGAAAAGTTCGGTTAGTGACATGAAGAAAAGTTTGGAAGATCTTCCTTCAAGTTTTAGAGGGCTGAAAGTCATTGTCATTGATGGAAAACCTGTTAGAGCTGCTGTGACTAGATACCATTTGAAGAGACTAGGTATACTAGTTAAAGTTGAAAATAGCATCAGTAAGGCTGTTGCTTTATGTGGTAAAAGTGATTCTTTGAACTCAGGAACGTTCCTGCCAGATATTATCATGGTTGAGAAAGACACATGGATATCGGGCGAGGATGGGATTTTCAATGTATGGAAACAGAATGGTCACATGTTTAAGAGGCCTAAAATGATCCTTCTGGCAACCAATATTAGTAAAACTGAATTTGATAAAGCTAAGGCCATGGGTTTCAGTGATACTGTGATCATGAAGCCTCTGAGAGCTAGTATGGTGGCTGCTTGTCTTCAGCAAGTTTTGGGGATGGGGAAGAAGAGGCAGCTAGGGAAAGACATGCCTAATGGTTCTGCTTTTCTACAAAGCCTTCTCTATGGAAAGAAAATCTTGGTGGTTGATGACAATGGAGTAAACCGAAGGGTTGCTGCAGGTGCTCTGAAAAAGTTTGGAGCTGATGTGAAATGTGCTGAAAGTGGCAAAGCCGCACTTGAAATGCTGCAATTGCCTCACAATTTTGATGCTTGCTTCATGGACATTCAAATGCCAGAAATGGACGGATTTCAAGCAACAAGCCAAATTCGGATGATGGAGAGCAAGGCAAATGAGGAGATGAAGAATGGGAGTGAGTGGCATGTGCCTATATTGGCCATGACAGCTGATGTGATCCATGCTACATATGATGAGTGCTTGAAACGAGGCATGGATGGATATGTCTCAAAGCCATTTGAGGAAGAGAATCTGTATCAGGAAGTTGCAAAGTTTTTCAAATCAAAGACCATCTCAGACTCATCACAATCTGCTTCTTACTTGGCAACCAACTAG 2994 0.4188 MGLSLKMQSHHPVALRLYDQMGSKRKYTFIQAHRAWLPKFLLLWILLMALISWCIFSKMDDDTKVRRKEVLGSLCDQRARMLQDQFSVSVNHVHALAILVSTFHYYRYPSAIDQETFAEYTARTAFERPLLSGVAYAQRVVKSEREKFEKEHGWVIKTMEEKSSLVRDEYAPVIFAQETVSYLESLDMMSGEEDRENILRARATGKAVLTSPFRLWGSHHLGVVLTFPVYKSKLPQKTTVEERIEATAGYVGGSFDVESLVENLLGQLAGNQAILVNVYDITNYTNPLIMYGKPYEEGDVSLAHESKLDFGDPYRKHQMICRYHQKAPTNWIAVTTAFLFFVILILVGYILYGAGNHIVKVEDDFHEMQELKVRAESAHVAKSQFLATVSHEIRTPMNGILGMLALLLDTELSSTQRDYAQTAQACGKALITLINEVLDRAKIEAGKLELEAVPFDLRSILDDVLSLFSEKSRHKGLELAVFVSDKVPDIVMGDPGRFRQIITNLVGNSVKFTEHGHIFVKVHLGDNRKPTLNGKHTNGESDEVFHISDDYHFKTLSGREAADERNSWDNFKHLIADEKSCLDSSRETVATSETSEQVTLRVCVEDTGIGIPFSAQDRIFMPFVQADSSTSRNYGGTGIGLSISKCLVELMGGKINFISRPQIGSTFSFTAVCGTFKKSSVSDMKKSLEDLPSSFRGLKVIVIDGKPVRAAVTRYHLKRLGILVKVENSISKAVALCGKSDSLNSGTFLPDIIMVEKDTWISGEDGIFNVWKQNGHMFKRPKMILLATNISKTEFDKAKAMGFSDTVIMKPLRASMVAACLQQVLGMGKKRQLGKDMPNGSAFLQSLLYGKKILVVDDNGVNRRVAAGALKKFGADVKCAESGKAALEMLQLPHNFDACFMDIQMPEMDGFQATSQIRMMESKANEEMKNGSEWHVPILAMTADVIHATYDECLKRGMDGYVSKPFEEENLYQEVAKFFKSKTISDSSQSASYLATN* 998
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0158 997 PANTHER TWO-COMPONENT HISTIDINE KINASE 22 983 - -
Pvu3g0158 997 PRINTS Bacterial sensor protein C-terminal signature 600 614 IPR004358 GO:0016310|GO:0016772
Pvu3g0158 997 PRINTS Bacterial sensor protein C-terminal signature 618 628 IPR004358 GO:0016310|GO:0016772
Pvu3g0158 997 PRINTS Bacterial sensor protein C-terminal signature 635 653 IPR004358 GO:0016310|GO:0016772
Pvu3g0158 997 PRINTS Bacterial sensor protein C-terminal signature 659 672 IPR004358 GO:0016310|GO:0016772
Pvu3g0158 997 Pfam His Kinase A (phospho-acceptor) domain 381 446 IPR003661 GO:0000155|GO:0007165
Pvu3g0158 997 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 435 670 IPR036890 -
Pvu3g0158 997 Gene3D CHASE domain 112 327 IPR042240 -
Pvu3g0158 997 PANTHER HISTIDINE KINASE 4 22 983 - -
Pvu3g0158 997 Gene3D - 846 987 - -
Pvu3g0158 997 Gene3D - 693 829 - -
Pvu3g0158 997 SMART REC_2 851 975 IPR001789 GO:0000160
Pvu3g0158 997 CDD HisKA 381 442 IPR003661 GO:0000155|GO:0007165
Pvu3g0158 997 CDD REC_hyHK_CKI1_RcsC-like 853 975 - -
Pvu3g0158 997 CDD HATPase_EvgS-ArcB-TorS-like 498 671 - -
Pvu3g0158 997 ProSiteProfiles Histidine kinase domain profile. 388 670 IPR005467 -
Pvu3g0158 997 SMART CHASE_2 108 293 IPR006189 -
Pvu3g0158 997 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 493 671 IPR003594 -
Pvu3g0158 997 Gene3D - 355 444 - -
Pvu3g0158 997 ProSiteProfiles CHASE domain profile. 108 320 IPR006189 -
Pvu3g0158 997 Pfam CHASE domain 111 291 IPR006189 -
Pvu3g0158 997 Pfam Response regulator receiver domain 853 975 IPR001789 GO:0000160
Pvu3g0158 997 SUPERFAMILY CheY-like 694 826 IPR011006 -
Pvu3g0158 997 SMART HisKA_10 381 446 IPR003661 GO:0000155|GO:0007165
Pvu3g0158 997 SMART HKATPase_4 493 675 IPR003594 -
Pvu3g0158 997 ProSiteProfiles Response regulatory domain profile. 699 825 IPR001789 GO:0000160
Pvu3g0158 997 ProSiteProfiles Response regulatory domain profile. 852 979 IPR001789 GO:0000160
Pvu3g0158 997 Gene3D - 59 111 - -
Pvu3g0158 997 SUPERFAMILY CheY-like 850 979 IPR011006 -
Pvu3g0158 997 Gene3D - 445 676 IPR036890 -
Pvu3g0158 997 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 367 447 IPR036097 GO:0000155|GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0158 Pvu-Chr3 1411225 1417895 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g0158 11 988 Histidine Kinase Gene Family AT2G01830 70.400 0.0 1386
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pvu3g0158 HATPase_c 4.8e-31 CL0025
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g0158 3 1411225 1417895 Pvu3g0158 3 1411225 1417895 ECH