Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0150 ATGATTGGAGGCCAAGATCTTGTTCCCAATGGCGTGGACACCGAGGGAGAGAACTCGAGGAGCAAGGTGCAGCAGCAGCAGCATCAGCATCGTGATTTTTCTCAGGGCAAGGAATACCCACAGGAGAAAAAACAGAGTTACCCAGAGAAGAAGAAGGTTGGTGTTGATGAGTTTCAGACACCAAACTCAGAATTTGGCTCTTCTGGGTTGCAAGAGTTGACCCTCAGCTACCTCTGTGACAACCCAAAATTGAGTCTTGTCGAGAGAGAGGTTGATGGCAGAAGCTTGGTGAAGGGCAAAGGAGTTGTGGTTTATGGGAATTCAGATCAAGATCAAGAGGAGTTAAGGTTTAAATCATCTCTGGAAGAGGTGCCTGCATTTAGTGCGCGACAATACTTCGACCAGGATTGTCTTCGGAGGAAGGTGGCTGTTGGGAACCAAAAGCAAGATCAGGATGAGAAGTGGGTAGAGAGGGATTTCTTGAGTTTGAGTGAGTCAAGGGAGAATTCTTCAAAGAGATCCATTGATGATGAGTGTGAGAGGGAGAAGAGTGGAGGCAGCAAGAAGCAGAAGCTTGAGACTCTTAGTCTCTCTCTTGCTTTGCCTGATGTGTCGCTCTCTCTCACAGCCTCAAACGCTTTGCAAAACGGTGACCAAGTTGTTAGGCCAAAGCCTGGTATGCCATCCACAAGGCCCACAACTACGATCAATTCGTGTTCAAATGATTACACTGCAGCTTCTATGTCTCAATCTTACTCTCACCCTTTCTCACACAACCCAAGTTGCTCAATCACCCGAAATTCAACCGACAATTTTGAGTATTCGCACAGCAAAGATGATCAAATCTGGCATTGTGGGGAGGGGACTAATGGGTCAGTTCATAGCAGGTTCAAGCCGATAGGAGATGGGGTTGCTTTGGCCAATCATTCCTTTATGCAAGGGAACAGTCACTATAAGGCTACTAGCTCAGATAACCAGTCTTTTTTCCCTTCAGAATTGCCTGCAAGAGTGAGATTTGAAGCTCAGTCTGAGGGCTCAAGGGGAAAGAATTCTGAGAATCTGAGAGGCTTGGAAGGTGTGGATGGTGGGAGGATGAAGTTTTCTAGATCAGAGAGAGTTCTAAGAGAAATTGTGTCCGAGTCTATCCCAGCCATGGCTTTGCAATTTCAGGAGTTCACTGATGAAGTCATAACTTCAATCAAGGAATACTTGAAAGGTCTCATTGATATGCCAGAGAAGAAAGGGGAATTGATGAACCTCCAGAGTCGGCTTGGCCGAAGATCTGACATCACCAGGGAGACTCTTTCCAAGTGTCATAAAGAGCAGCTAGGGATTTTGACTGCTATCAAGATGGGGCTTGGGAGTTTCTTGTCTGGTAAGTTCCAAATCTTGGAGATGGTGGAGGTTTTCTTGTATATGAGATGTAGAAATGTGAACTGCAAGAGCTTTCTGCCTGTTGAAGACTGTGACTGCAAGATGTGCTCAGGAAATAAGGGGTTTTGCAGCTCTTGCATGTGTCCTGTCTGTATGAGCTTTGACTGTGCAAGTAATACTTGTAGTTGGGTTGGTTGTGATGTTTGTTCTCACTGGTGTCATGCTACCTGTGCCATTCAGAAGAATCTAATCAAACCTGGGCCTATCTTGAAGGGTCCTTCTGGTTCTTCTGAGGTGCAGTTTCATTGTATTGGCTGTGGACATACTTCAGAAATGTATGGCTTTGTTAAAGAGGTCTTTGTGTGTTGTGCCAAGGATTGGGGCCTAGAAACATTGATAAAGGAGCTTGACTGTGTGAGGAGGATTTTCCAGGGAAGTGAAGATCTCAAAGGGAAGGAATTGCATTTTAAGATGGATGATATGCTGTCAAAACTTCAAGCTAAACTGGTTTCTCCTTCGGATGCCTGCAACTTTATCATACAGTTTTTCAGCTACACAGATGGCATGTCAGATTTCCCAGTTTCTGCTATACCCACAAAGGATTTGCCAAAATCTAAGAATAACCTTACAGTAGAGACAACATCATCTCTTCCACAATCTACTTCTCTGATACCAAAATACACTTATGACATGAGCTTCACTAGGTCAAATGATCTTCAACAGAAGGACCTCAAAACCTCCCTCTTGAGTGAGCAGAAAAAGGAGTCTGATTTGCACCTTGAGGCTTTACTAAGGAAAGGAGGAGGGCTTGAAAGCTTGGAGAGCATCATACGGATAAAAGAGGCGGAAGCCGGAATGTTCCAGAACAAGGCAGATGAGGCAAGGAAAGAAGCAGAGGGATTCCAGAAGATGATCAAGACAAATGCTGCACAGATGGAAGAGTATACAGAAAGGCTTGGCAAGCTTTGCTTGCATGAGGCAGAGGAAAGGAGGAAGAAGAAATTTGAGGAACTCAATGTCTTGCAAAATTCACACTATGATTACTTCAACATGAAAAGCAGAATGCAAGATGAGATTCATGGTTTGTTGAAGAGAATGGAAGCAACAAAGCAGCAATGGGTTTAA 2499 0.445 MIGGQDLVPNGVDTEGENSRSKVQQQQHQHRDFSQGKEYPQEKKQSYPEKKKVGVDEFQTPNSEFGSSGLQELTLSYLCDNPKLSLVEREVDGRSLVKGKGVVVYGNSDQDQEELRFKSSLEEVPAFSARQYFDQDCLRRKVAVGNQKQDQDEKWVERDFLSLSESRENSSKRSIDDECEREKSGGSKKQKLETLSLSLALPDVSLSLTASNALQNGDQVVRPKPGMPSTRPTTTINSCSNDYTAASMSQSYSHPFSHNPSCSITRNSTDNFEYSHSKDDQIWHCGEGTNGSVHSRFKPIGDGVALANHSFMQGNSHYKATSSDNQSFFPSELPARVRFEAQSEGSRGKNSENLRGLEGVDGGRMKFSRSERVLREIVSESIPAMALQFQEFTDEVITSIKEYLKGLIDMPEKKGELMNLQSRLGRRSDITRETLSKCHKEQLGILTAIKMGLGSFLSGKFQILEMVEVFLYMRCRNVNCKSFLPVEDCDCKMCSGNKGFCSSCMCPVCMSFDCASNTCSWVGCDVCSHWCHATCAIQKNLIKPGPILKGPSGSSEVQFHCIGCGHTSEMYGFVKEVFVCCAKDWGLETLIKELDCVRRIFQGSEDLKGKELHFKMDDMLSKLQAKLVSPSDACNFIIQFFSYTDGMSDFPVSAIPTKDLPKSKNNLTVETTSSLPQSTSLIPKYTYDMSFTRSNDLQQKDLKTSLLSEQKKESDLHLEALLRKGGGLESLESIIRIKEAEAGMFQNKADEARKEAEGFQKMIKTNAAQMEEYTERLGKLCLHEAEERRKKKFEELNVLQNSHYDYFNMKSRMQDEIHGLLKRMEATKQQWV* 833
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0150 832 PANTHER PROTEIN OBERON 3 1 832 - -
Pvu3g0150 832 PANTHER VERNALIZATION-INSENSITIVE PROTEIN 3 1 832 IPR004082 -
Pvu3g0150 832 MobiDBLite consensus disorder prediction 171 189 - -
Pvu3g0150 832 MobiDBLite consensus disorder prediction 24 57 - -
Pvu3g0150 832 Pfam Coiled-coil region of Oberon 694 821 IPR032535 -
Pvu3g0150 832 Pfam PHD - plant homeodomain finger protein 475 599 IPR032881 -
Pvu3g0150 832 MobiDBLite consensus disorder prediction 171 190 - -
Pvu3g0150 832 CDD PHD_OBE1_like 505 564 - -
Pvu3g0150 832 MobiDBLite consensus disorder prediction 1 68 - -
Pvu3g0150 832 Coils Coil 735 755 - -
Pvu3g0150 832 Coils Coil 810 830 - -
Pvu3g0150 832 Coils Coil 782 802 - -
Pvu3g0150 832 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 388 410 IPR004082 -
Pvu3g0150 832 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 427 442 IPR004082 -
Pvu3g0150 832 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 466 487 IPR004082 -
Pvu3g0150 832 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 512 532 IPR004082 -
Pvu3g0150 832 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 585 604 IPR004082 -
Pvu3g0150 832 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 729 749 IPR004082 -
Pvu3g0150 832 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 767 789 IPR004082 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0150 Pvu-Chr3 1349848 1353831 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g0150 475 627 PHD Gene Family AT5G57380 22.876 1.13e-07 53.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g0150 3 1349848 1353831 Pvu3g0150 3 1349848 1353831 ECH