Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0132 ATGACGCTATGGATCAAGGCCACGGGAGCGTTGAAGGATAGATACAGCATTTGGGTGGCGAAGCTCTTGCCAAGTGGGCCATGCAGGAACCCTGATCTTGAAATGGTGATCATCAAGGCCACGAGCCACGATGAACAATGCATGGATTACAAGAACGTTCAGAGGGTTTTCAAATGGCTTCGCACTTCACCATTGTACCTTCAGCCTCTTCTCTACACTCTTTCCATAAGGATGGAGAAGACTCGTTCGTGGGTGGTGGCTCTCAAGGGGTTGATGCTCATTCATGGAGTGTTTTGTTTTGATCTTCCCGCAGTGCAGAAAATGGGAAGGTTGCCGTTTGATTTGTCACTGTTCAGCGACGCATACATAAACCCTAATAGGGCTTGGGTTTACAACGCGTTTGTTAGGGCTTATTTCTTGTATTTGGATCAGAAGTCAGCGTTTGTGAGGGTGGAAGCAACGAGAGAGAGCAAGAGTGGGGGCAAGGAGAAGGAAGAGAGCGTGATGGAAGAGCTGCAGAGCTTGGAGAAGCTTCTTGGTTTGATTGATTTGCTTCTTCAGATCAAACCTAGGAGCCCTAACATGAACGTGGTGCTTGTTCTTGAGGCCATGGATTGTGTGATGGATGAGGTTTTGGAAATGTATGGAAAGTTTTCTTCTAGGGTTCATCGGGCTGTGTCGAGGGTACTTGACATGGGTGGGATAGAGGAAGCTAAGTGTGGTCTTGATGTTGTGAGAAAAGCTGAATTGCAAGGGGCTAAGATGACTACATATTTCAACTTCTGTAAGGACATTGGGGTCCTTAATGTTTCTGACTGCCCTGAAATTGTGAGGGTGGATGAGAAAGACATTGATGAACTGAAAAGAATAAGAGAGGGAAGAACGATGGAGAGTGATGAAAATGATGATGATGATGATGATGATGAGAAGAATGGTGATTGTAGAGCCATTGTGACCGTTCCTGAGAGGAATCAAGTGGGTTTGAAGACTGTGATCACTAACCAATGGGAAGTGTTTGATGATGATTTGATAGTTATGGATGGTGCAAGTGTGCCCTTGGCCACAGCAAATAATAACCCTTTTCTTGATTATTCTTTGAGCCTAGTACCCTATGTTCCCGTTTCCAACAGTGTTCTTCCAGATTTGATTATTTTGTAG 1158 0.4499 MTLWIKATGALKDRYSIWVAKLLPSGPCRNPDLEMVIIKATSHDEQCMDYKNVQRVFKWLRTSPLYLQPLLYTLSIRMEKTRSWVVALKGLMLIHGVFCFDLPAVQKMGRLPFDLSLFSDAYINPNRAWVYNAFVRAYFLYLDQKSAFVRVEATRESKSGGKEKEESVMEELQSLEKLLGLIDLLLQIKPRSPNMNVVLVLEAMDCVMDEVLEMYGKFSSRVHRAVSRVLDMGGIEEAKCGLDVVRKAELQGAKMTTYFNFCKDIGVLNVSDCPEIVRVDEKDIDELKRIREGRTMESDENDDDDDDDEKNGDCRAIVTVPERNQVGLKTVITNQWEVFDDDLIVMDGASVPLATANNNPFLDYSLSLVPYVPVSNSVLPDLIIL* 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0132 385 Pfam ANTH domain 32 287 IPR011417 GO:0005543
Pvu3g0132 385 Gene3D ANTH domain 155 304 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
Pvu3g0132 385 CDD ANTH_N_AP180_plant 33 148 - -
Pvu3g0132 385 SUPERFAMILY ENTH/VHS domain 32 151 IPR008942 -
Pvu3g0132 385 MobiDBLite consensus disorder prediction 290 312 - -
Pvu3g0132 385 PANTHER CLATHRIN ASSEMBLY PROTEIN 1 383 IPR045192 GO:0048268|GO:0072583
Pvu3g0132 385 Gene3D - 5 153 IPR008942 -
Pvu3g0132 385 ProSiteProfiles ENTH domain profile. 25 156 IPR013809 -
Pvu3g0132 385 PANTHER OS08G0467300 PROTEIN 1 383 - -
Pvu3g0132 385 SUPERFAMILY GAT-like domain 164 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0132 Pvu-Chr3 1203331 1204488 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g0132 3 1203331 1204488 Pvu3g0132 3 1203331 1204488 ECH