Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g3318 ATGGGCGAAGACATTGTTGAGAGGGCGCTGAACAGTTTAGGAAAAGGTTTCGACTTGACTTTTGATTTCAGACTCAAGTTCTGCAAAGGAGAAGAACGTTTGGTTCTTCTCAACGAAACCGAGAAACGAGAGCTCACGGTGCCAGGTTTCGGACCCATCAGCGATGTCTCCGGCGACATCAAATGCGACAAGGGCGATTGCACCCGCTACCAATCGGACATCCTCACCTTCAATCAAATGTCAGAGTTCTTCAACCAGAAGAGTTCGATCCCTGGGAGAATCCCATCTGGGTACTTCAACACCGTGTTTGGGTTTGATGAATGTTCCTGGGCAATCGATGCTGCTAACACCAAGTGTTTGGGTATTGATGCTTTTTTCATCAAACTCTTCAGTGTTCATATTGATCGCTACCCTCTTCTTCTCTCTCATGAAGTCCTTCAAGCTGTTCCTTCTTCCTGGGACCCCCCTGCACTTGCAAGATTCATTGAGAATTTCGGCACACACATCCTTGTGGGGCTTAGCATTGGTGGCCAAGATTTAGTGTTGGTGAAGCAAGACGTGTCTTCCAGCTTGGAGCCATCAGAGCTGAAGGGCCACTTGGATGAACTTGGAAATCAATTATTCACTGGGACATGCAGTTTCCTTCCAAGGTCCAAAGACCAAAAATACAAGGTACCACAGGCTTTTGATGTCTTTGGTCCTCAAATTGTTGCCTTCAATTGCTCTACATCAGTTTGTACAAAAGATGGAATTAGTGTGATATGTGCAAAGAGGGGTGGGGATACCCAACTGAGGGACCATAGTGAGTGGCTTCAGACAGTTCTAAAGAAACCAGATGCTGTTGATTTTAGCTTCATTCCCATCACTTCTCTTCTTAAAGGTGTTCCAGGCAAAGGCTTTCTATCCCATGCCATCAACCTCTACCTTCGATATAAGCCTCCCATGTCAGATTTACCCTACTTTCTTGACTATCAATCACACAAGCTTTGGGCTCCCATTCACAATGATCTTCCACTGTGTCCAGCCACAAACAGAACCACCTCCTCACCTTCTCTCAGTTTCAACTTGATGGGTCCCAAGCTTTATGTAAACACATCAAAGGTAACAGCTGGTAAAAGGCCAATCACAGGGATCCGTTTGTTTCTTGAGGGCATGAAATGCAACAGATTAGCCATACACGTGCAACATCTATTGAACACTCCGACAATGCTTAACGACAAAATAGAAGACACCCCATTATGGTCAGAAGAAATCAGTGATGAACGTTTCTTTGAAGCAATCAATGGGAAGAAATTCTCCCATGTATGCACAGCACCAGTAAAATACGACCCCAGATGGAGCTCTGATAAAGATGTGGCCTTTATAGTCACAGGTGCCCAACTTTATGTGAAGAAACATGACTCAAGGAGTGTACTTCATCTGAGACTGATGTTCTCTAAGGTGTCTAATTTTGTAGTTGTGAAATCAAGTTGGACACAGGGCTCCTCTGGGTTATCACAGAGATCTGGCATTTTCTCAGTAATAAGCACATCAATTTCAGGTAAAGACCAGAAAAAACCAGTTGTAGTTTTGGATTCCAGTGTGTTTCCAACAGGACCTCCAGTGCCTGTGCAAACGCAAAAGATGTTGAAATTTGTAGACACTTCACAGTTGTGTAAAGGGCCACAAGATAGTCCTGGCCATTGGTTGGTCACTGGGGCAAGGTTGGTGTTGGACAAGGGTAAGATATGCTTATGGGCTAAGTTCTCTTTGTTAAATACTGCTTCCTGA 1770 0.4452 MGEDIVERALNSLGKGFDLTFDFRLKFCKGEERLVLLNETEKRELTVPGFGPISDVSGDIKCDKGDCTRYQSDILTFNQMSEFFNQKSSIPGRIPSGYFNTVFGFDECSWAIDAANTKCLGIDAFFIKLFSVHIDRYPLLLSHEVLQAVPSSWDPPALARFIENFGTHILVGLSIGGQDLVLVKQDVSSSLEPSELKGHLDELGNQLFTGTCSFLPRSKDQKYKVPQAFDVFGPQIVAFNCSTSVCTKDGISVICAKRGGDTQLRDHSEWLQTVLKKPDAVDFSFIPITSLLKGVPGKGFLSHAINLYLRYKPPMSDLPYFLDYQSHKLWAPIHNDLPLCPATNRTTSSPSLSFNLMGPKLYVNTSKVTAGKRPITGIRLFLEGMKCNRLAIHVQHLLNTPTMLNDKIEDTPLWSEEISDERFFEAINGKKFSHVCTAPVKYDPRWSSDKDVAFIVTGAQLYVKKHDSRSVLHLRLMFSKVSNFVVVKSSWTQGSSGLSQRSGIFSVISTSISGKDQKKPVVVLDSSVFPTGPPVPVQTQKMLKFVDTSQLCKGPQDSPGHWLVTGARLVLDKGKICLWAKFSLLNTAS* 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g3318 589 SMART MACPF_8 117 310 IPR020864 -
Pvu2g3318 589 ProSiteProfiles Membrane attack complex/perforin (MACPF) domain profile. 1 322 IPR020864 -
Pvu2g3318 589 Pfam MAC/Perforin domain 102 308 IPR020864 -
Pvu2g3318 589 PANTHER OS02G0736300 PROTEIN 3 587 - -
Pvu2g3318 589 PANTHER MACPF DOMAIN-CONTAINING PROTEIN CAD1 3 587 IPR044663 GO:0006952|GO:0012501|GO:2000031
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g3318 Pvu-Chr2 48136283 48142735 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g3318 2 48136283 48142735 Pvu2g3318 2 48136283 48142735 ECH