Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g3310 ATGGCCACCATGACCAGCTTGATCGGTCTCATCAATAAGATCCAACGAGCCTGCACCGTTTTGGGCGATTACGGCGGCGAGGGTTTATCGCTCTGGGAAGCTCTTCCCTCCGTCGCCGTCGTCGGTGGCCAGAGTTCGGGAAAATCGTCGGTGCTTGAAAGCGTGGTGGGAAGAGATTTTTTGCCTCGTGGATCTGGTATTGTTACACGGAGACCGTTAGTGCTGCAACTTCACAAGACAGACAATGGGACACAGGAATATGCGGAGTTTCTTCACTTACCGAGAAAGAGATTCACTGACTTCGCTGCTGTGAGGAAGGAAATTGCAGATGAAACAGATCGTATAACTGGGAAGACAAAGCAAATTTCTAACATTCCAATTCAGCTCAGCATTTATTCTCCTAATGTTGTAAATTTAACCCTCATAGATCTTCCTGGGCTGACAAAGGTTGCAGTAGAGGGACAGCAGGAGAGTATTGTTCAAGATATCGAAAACATGGTTCGATCTTATGTTGAAAAGCCAAATTGCATTATCTTAGCTATCTCTCCCGCAAATCAAGATATTGCCACATCAGATGCCATAAAAATCGCAAGAGAAGTTGATCCTTCAGGTGAAAGAACGTTTGGTGTTGTTACCAAACTTGATCTTATGGATAAAGGAACTAATGCGGTTGATGTTCTTGAGGGAAGGCAATACAGACTGCAGCATCCATGGGTTGGAATTGTGAACCGTTCACAAGCTGATATTAATAAGAATGTTGACATGATTGCTGCTCGTAGGAAGGAACGTGAATATTTTGAGACAAGTCCTGAATATGGACATTTGGCACATAAAATGGGATCAGAATATCTTGCTAAGCTTTTATCTCAGCATTTGGAGCAAGTTATCAGGCAGAAGATACCAAGTATCATTTCCTTAATAAATAAGACTATTGATGAGCTAAATGCCGAGCTGGACCGAATTGGCAGGCCAATTGCTGTGGATTCAGGGGCCCAACTATACACTATTTTAGAGATGTGTCGTGCATTTGACAAAGTTTTTAAAGAACACCTGGAGGGAGGCCGTGCTGGTGGGGACCGGATATATGGAGTTTTTGATCATCAATTACCAGCTGCTCTAAAAAAGCTCCCTTTCGATCGCCATCTTTCGCTGAAAAATGTCCAGAGAGTTGTCACTGAAGCTGATGGGTATCAGCCCCATCTGATTGCTCCCGAGCAGGGTTATAGAAGACTAATTGAAGGATCTATCGGCTATTTCAAAGGCCCAGCTGAAGCATCCGTGGATGCTGTTCACTTTGTTTTAAAGGAACTTGTACGGAAATCAATTGCAGAAACTGAGGAACTAAAAAGATTTCCAACACTTGCAAATGATATAGCAACTGCTTCAAATGAATCTCTGGAAAAATTCCGAGAAGAAAGCAGGAAGACAGTTACACGGTTGGTTGATATGGAGTCTAGCTATCTAACAGTGGAGTTTTTCAGGAAGATTCATTTTGAACCAGAAAAGAATCCAACTGGACCACCAAATCCAAATCGGAATGGTCCCCCAAATATGGACAGTTACACTGACAATCACCTGCGCAAAATTGGATCAAATGTAAGTTCCTATATCAGTATGGTTTGCGATACACTGAAGAATACCATACCCAAGGCCGTGGTTCATTGTCAAGTTAGAGAGGCTAAGCGATCTTTGCTAAACCACTTTTACGTTCAAGTAGGGAGGAAGGAGAAGGAAAAATTAAGTGCTATGTTGGATGAAGATCCTTCTCTTATGGAAAGGAGAAATCAAATAGCCAAAAGGCTTGAATTATACAAGCAAGCTAGGGATGATATTGACTCGGTGGCTTGGAAATAA 1854 0.4266 MATMTSLIGLINKIQRACTVLGDYGGEGLSLWEALPSVAVVGGQSSGKSSVLESVVGRDFLPRGSGIVTRRPLVLQLHKTDNGTQEYAEFLHLPRKRFTDFAAVRKEIADETDRITGKTKQISNIPIQLSIYSPNVVNLTLIDLPGLTKVAVEGQQESIVQDIENMVRSYVEKPNCIILAISPANQDIATSDAIKIAREVDPSGERTFGVVTKLDLMDKGTNAVDVLEGRQYRLQHPWVGIVNRSQADINKNVDMIAARRKEREYFETSPEYGHLAHKMGSEYLAKLLSQHLEQVIRQKIPSIISLINKTIDELNAELDRIGRPIAVDSGAQLYTILEMCRAFDKVFKEHLEGGRAGGDRIYGVFDHQLPAALKKLPFDRHLSLKNVQRVVTEADGYQPHLIAPEQGYRRLIEGSIGYFKGPAEASVDAVHFVLKELVRKSIAETEELKRFPTLANDIATASNESLEKFREESRKTVTRLVDMESSYLTVEFFRKIHFEPEKNPTGPPNPNRNGPPNMDSYTDNHLRKIGSNVSSYISMVCDTLKNTIPKAVVHCQVREAKRSLLNHFYVQVGRKEKEKLSAMLDEDPSLMERRNQIAKRLELYKQARDDIDSVAWK* 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g3310 617 Gene3D - 4 310 IPR027417 -
Pvu2g3310 617 ProSiteProfiles GED domain profile. 526 617 IPR020850 -
Pvu2g3310 617 Pfam Dynamin central region 222 489 IPR000375 -
Pvu2g3310 617 ProSitePatterns Dynamin-type guanine nucleotide-binding (G) domain signature. 61 70 IPR019762 -
Pvu2g3310 617 Gene3D Dynamin, middle domain 334 594 - -
Pvu2g3310 617 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 10 309 IPR027417 -
Pvu2g3310 617 Pfam Dynamin family 38 213 IPR045063 -
Pvu2g3310 617 PANTHER DYNAMIN 4 617 IPR022812 -
Pvu2g3310 617 Pfam Dynamin GTPase effector domain 522 614 IPR003130 GO:0003924|GO:0005525
Pvu2g3310 617 PRINTS Dynamin signature 35 53 IPR022812 -
Pvu2g3310 617 PRINTS Dynamin signature 60 77 IPR022812 -
Pvu2g3310 617 PRINTS Dynamin signature 133 150 IPR022812 -
Pvu2g3310 617 PRINTS Dynamin signature 183 201 IPR022812 -
Pvu2g3310 617 PRINTS Dynamin signature 202 218 IPR022812 -
Pvu2g3310 617 PRINTS Dynamin signature 225 244 IPR022812 -
Pvu2g3310 617 SMART dynamin_3 4 252 IPR001401 GO:0003924|GO:0005525
Pvu2g3310 617 ProSiteProfiles Dynamin-type guanine nucleotide-binding (G) domain profile. 32 301 IPR030381 GO:0005525
Pvu2g3310 617 SMART GED_2 521 614 IPR003130 GO:0003924|GO:0005525
Pvu2g3310 617 CDD DLP_1 35 301 IPR001401 GO:0003924|GO:0005525
Pvu2g3310 617 PANTHER BNAA09G45430D PROTEIN 4 617 - -
Pvu2g3310 617 MobiDBLite consensus disorder prediction 499 520 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g3310 Pvu-Chr2 48091104 48099000 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g3310 2 48091104 48099000 Pvu2g3310 2 48091104 48099000 ECH