Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g3306 ATGTCATCGCCAAACGCCGCCCCTCAGCCCCACGCGCCGCTCCTTCTCCCGCGACCCGATGCCGCCGCGGCCCGTCTCCCTGTCCTCGCGCTCCTCCTAGGCCGCCGCGGCCACTCCGCCGTCGTCCGGGAGACTGCGGCCCGTGAGCTCGAGGAGCGCCGCGCCGACTGGACGTACTCGAAGCCAGTGGTGGCGCTCGACGTGACGTGGAACATGGCCTTCGTGGTGGTCTCGGTGGTGATGCTCGCCTGCACCGTCAAGGAGAAGCCCAACATGCCGATCCGGTGGTGGATCTGCGGCTACGCGCTGCAGTGCCTCGTCCACGTTGCGCTGGTGTGGCTCGAGTACCGGAGGAGGAGCGACGTCCCCCGGGACGAAGAGTCCGGCGGCCACCTCGATTACGATGACGTCAACGACAGCGACGAGGAGGATGTTGGATCCTCCGAGAGTTACTTTTCCACTGGATTCACAAAACGATGCACATCATTGAATACCATGGTTTCGTTACTTTGGTGGATGGTGGGTTTTTACTGGGTTGTCTCTGGTGGTGATGTTCTTCTGCAAGATGCTCCACGTTTGTACTGGTTGGCTGTTGTCTTTCTTGCATTTGATGTCTTCTTTGCCATCTTTTGTGTTGTCTTGGCATGCTTGATTGGAATTGCCCTCTGTTGTTGTTTACCCTGTATTATTGCCATTCTCTATGCTGTTGCAGGACAGGAGGGTGCATCGGAATCGGACCTCAGTGTACTTCCGAAATTCAGATTTCAAATGATAAGCAATGAAGAAACACCTAGTAAGGGAGGTGGATCAATGATTCCTGTGGAGACCATCAATGGTTACTCAGTGAATGAACGAATACTTTCACCCGATGATGCAGAATGTTGTATATGCATATCTTCTTATGAGGATGGAGCAGAACTTCATGTTCTTCCATGTAACCATCATTTCCATTCTACATGTATAGTGAAATGGCTAAAGATGAATGCAACTTGTCCTCTTTGCAAGTTCAATATTCTGAAGGGAAATGAACAGGTGTGA 1038 0.5289 MSSPNAAPQPHAPLLLPRPDAAAARLPVLALLLGRRGHSAVVRETAARELEERRADWTYSKPVVALDVTWNMAFVVVSVVMLACTVKEKPNMPIRWWICGYALQCLVHVALVWLEYRRRSDVPRDEESGGHLDYDDVNDSDEEDVGSSESYFSTGFTKRCTSLNTMVSLLWWMVGFYWVVSGGDVLLQDAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASESDLSVLPKFRFQMISNEETPSKGGGSMIPVETINGYSVNERILSPDDAECCICISSYEDGAELHVLPCNHHFHSTCIVKWLKMNATCPLCKFNILKGNEQV* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g3306 345 PANTHER TARGET OF ERK KINASE MPK-1 1 345 - -
Pvu2g3306 345 Pfam Ring finger domain 293 335 IPR001841 -
Pvu2g3306 345 CDD RING-H2_PA-TM-RING 293 335 - -
Pvu2g3306 345 MobiDBLite consensus disorder prediction 123 150 - -
Pvu2g3306 345 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 1 345 - -
Pvu2g3306 345 SUPERFAMILY RING/U-box 284 339 - -
Pvu2g3306 345 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 272 343 IPR013083 -
Pvu2g3306 345 ProSiteProfiles Zinc finger RING-type profile. 294 335 IPR001841 -
Pvu2g3306 345 SMART ring_2 294 334 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g3306 Pvu-Chr2 48070793 48074236 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g3306 1 344 C3H Transcription Factor Family AT1G68070 66.286 2.37e-167 468
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g3306 2 48070793 48074236 Pvu2g3306 2 48070793 48074236 ECH