Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g3304 ATGGCCGACGCTCTCTCGCTGATTCCGGCAGCCGTGCTTCGCAACCTTGCTGACAAGCTCTACGAGAAGCGTAAAAATGCTGCTCTTGATATTGAGGGGATAGTGAAGCAGCTAGCTACTGCTGGGGATCATGATAAAATAACGGCTGTTATCAATTTGTTGACTACGGAATTTACTTATTCACCACAAGCCAATCACCGGAAGGGAGGATTGATAGGATTAGCAGCTGCAACTGTTGGGTTGACTTCTGAAGCAGCTCAGCATCTTGAGCAAATTGTGCCCCCTGTGTTAAATTCTTTCTCTGACCAAGATAGCAGAGTTCGCTATTATGCTTGCGAAGCACTTTATAACATTGCCAAGGTTGTGAGAGGGGATTTTATTATTTTCTTCAATCAGATCTTTGATGCGCTATGCAAACTTTCAGCAGACTCAGATGCTAACGTACAGAGTGCTGCTCACCTCTTAGATAGGCTTGTGAAGGATATTGTGACTGAAAGTGATCAGTTCAGTATCGAAGAATTTATACCACTGTTGAGGGAGCGCATGAATGTTTTGAATCCATATGTCCGTCAGTTTTTGGTAGGATGGATTACTGTATTGGACAGTGTCCCAGATATTGACATGCTGGGATTTCTTCCTGATTTTCTTGATGGCTTGTTTAATATGTTGAGTGATTCAAGTCATGAAATTCGTCAACAAGCTGATTCAGCTCTTTCAGAGTTTCTTCAAGAGATTAAAAACTCCCCATCTGTAGATTATGGTCGCATGGCTGAAATCCTGGTACAGAGGGCTGGTTCTCCGGATGAATTTACTAGGTTAACAGCTATCACATGGATAAATGAGTTTGTCAAGCTTGGTGGAGACCAGCTTGTTCCATACTATGCTGACATTCTTGGAGCCATTTTGCCTTGTATATCAGATAAAGAAGATAAAATCAGAGTTGTTGCTCGTGAAACCAATGAAGAGCTACGTGCCCTCAAAGCGGATCCAGCTGAAGCGTTTGATGTAGGAGCAATCCTCTCCATTGCCAGGAGGCAATTATCTAGTGAATCGGAGGGTACTCGAATTGAAGCTTTGCACTGGATGTCAACCCTCTTAATCAAATATCGTAACGAGGTTTTGCAATATCTGAATGACATATTTGACACCCTGCTCAAAGCACTTTCAGATCCATCTGATCAGGTTGTTCTTCTTGTTCTTGATGTTCATGCATGCATAGCAAAAGATCCTCAGCATTTTCGGCAACTTGTTGTTTTCTTGATGCACAATTTCCGGGTAGACAATTCCCTTTTGGAGAAACGTGGTGCTTTGATAATTCGACGGCTCTGTGTACTTTTGAATGCTGAGAGAGTCTACCGTGAACTTTCCACTATACTAGAAGGGGAGTCTGACCTGGATTTTGCTTCAATTATGGTCCAGGCTTTGAATTTGATATTACTCACATCATCGGAACTATCCGAGATTCGATATCTTTTGAAGCAATCACTGGTTGATCCTGCTGGGAAGGATTTATATGTTTCTTTGTATGCCTCGTGGTGTCATTCTCCAATGGCAATTATAAGTCTCTGCTTATTAGCTCAGGCTTACCAACATGCGAGTTCTGTGATCCAGTCTCTGGTTGAAGAGGATGTTAATGTCAAATTCTTAGTCCAGCTTGATAAATTGATTCGCTTGCTGGAAACTCCTATATTTGCTTATCTAAGATTGCAGCTTCTCGAACCTGGAAGATATCCATGGCTGTTTAAAGCATTGTATGGTCTTCTGATGTTGCTTCCTCAGCAAAGTGCTGCCTTCAAGATTCTCAAAACTCGCTTAAAAGCCGTGCCATCGTATTCCTTCAACGGTGAGCAATTGAAAAAAACATCCTCAGGGAATCCCTATCATTTTCTCCAAAACATGTCTGGTGGATCTCAAATCAGTGAGGATGGTGACATGACTTTGGATCGTGGGAACTCACTCAATGGGATAAATTTTTCTGCAAGGTTACAACAGTTTCAGCAAATGCAGCACCAACATCGTGTGCATTTGAAAATACAGACGTCCAAATACTCCTCCTCATCAAAGGAAGCACAGAGACATGAAGAGCCAAAGCGACCTCAGTTGAGTGAGGTTAATGTTGTTGCTCCTTCAAGATCATCTAAAAGAGCCCAGGGTAGCTAG 2160 0.4236 MADALSLIPAAVLRNLADKLYEKRKNAALDIEGIVKQLATAGDHDKITAVINLLTTEFTYSPQANHRKGGLIGLAAATVGLTSEAAQHLEQIVPPVLNSFSDQDSRVRYYACEALYNIAKVVRGDFIIFFNQIFDALCKLSADSDANVQSAAHLLDRLVKDIVTESDQFSIEEFIPLLRERMNVLNPYVRQFLVGWITVLDSVPDIDMLGFLPDFLDGLFNMLSDSSHEIRQQADSALSEFLQEIKNSPSVDYGRMAEILVQRAGSPDEFTRLTAITWINEFVKLGGDQLVPYYADILGAILPCISDKEDKIRVVARETNEELRALKADPAEAFDVGAILSIARRQLSSESEGTRIEALHWMSTLLIKYRNEVLQYLNDIFDTLLKALSDPSDQVVLLVLDVHACIAKDPQHFRQLVVFLMHNFRVDNSLLEKRGALIIRRLCVLLNAERVYRELSTILEGESDLDFASIMVQALNLILLTSSELSEIRYLLKQSLVDPAGKDLYVSLYASWCHSPMAIISLCLLAQAYQHASSVIQSLVEEDVNVKFLVQLDKLIRLLETPIFAYLRLQLLEPGRYPWLFKALYGLLMLLPQQSAAFKILKTRLKAVPSYSFNGEQLKKTSSGNPYHFLQNMSGGSQISEDGDMTLDRGNSLNGINFSARLQQFQQMQHQHRVHLKIQTSKYSSSSKEAQRHEEPKRPQLSEVNVVAPSRSSKRAQGS* 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g3304 719 PANTHER PROTEIN VAC14 HOMOLOG 4 690 - -
Pvu2g3304 719 ProSiteProfiles HEAT repeat profile. 92 127 IPR021133 -
Pvu2g3304 719 Gene3D - 1 250 IPR011989 -
Pvu2g3304 719 MobiDBLite consensus disorder prediction 671 686 - -
Pvu2g3304 719 MobiDBLite consensus disorder prediction 671 719 - -
Pvu2g3304 719 PANTHER TAX1 BINDING PROTEIN-RELATED 4 690 IPR026825 GO:0006661|GO:0070772
Pvu2g3304 719 Gene3D - 251 479 IPR011989 -
Pvu2g3304 719 SUPERFAMILY ARM repeat 3 563 IPR016024 -
Pvu2g3304 719 MobiDBLite consensus disorder prediction 705 719 - -
Pvu2g3304 719 Pfam Vacuolar protein 14 C-terminal Fig4p binding 429 608 IPR021841 -
Pvu2g3304 719 Pfam Vacuolar 14 Fab1-binding region 65 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g3304 Pvu-Chr2 48047868 48055921 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g3304 2 48047868 48055921 Pvu2g3304 2 48047868 48055921 ECH