Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g3303 ATGATGGAGTCAAAGGGTGTGCGGTTCTTAGCGTACCAATCAATATTTTCGAGTGTTGGATCTGGGGACTTTGATGGGGTGAAGAAACTGGTGGAGAAAGTGAAGAACGAAGAAGAGTCATCGCTCTCTGATGTGATGTCTCTTCAGAACGATGCTGGAGAGACTGCACTTTACATCGCTGCAGAGCATAATCTGCAAGAGATTTTCAGCTACTTGCTCAACTTGTGTGACTTCGAAGCCCTCAAGATTCGCTCCAAGTCTGATATGAACGCCTTTCATGTTGCTGCCAAACGTGGCCATCTAGATATTGTGAAGGAGCTTCTGAATGTTTGGCCTGAGCTCTGCAAGTTATGCGACTCCTCAAACACCAGTCCTCTATATTCTGCTGCAGTTCAAGACCACTTGGATGTGGTGAATGCTATCTTGGATGTTGATGTCAGTTCAATGTTTATTGTTAGGAAAAACGGAAAAACTTCACTGCACAATGCTGCTAGGTATGGTCTGGTTCGCATTGTAAAAGCAGTTATTGGTAGGGATCCAGGAATAGTATGCATAAAAGATAGAAAAGGTCAAACTGCACTTCATATGGCTGTCAAAGGACAGTGTACCCTAGTAGTGGAGGAGATATTACTAGCTGATTCTTCTATATTGAATGAGAGAGATAAAAAGGGTAATACAGCTCTTCACATGGCTACAAGGAAATGCCGTTCACAGATAGTGATCCTTTTGCTAAGCTACTCTGCAATGGATGTTAATGCCATCAACAAGCAGCAAGAAACAGCCTTGGACTTGGCAGATAAACTGCCTTATGGAGATTCAGCTTTGGAAATCCAGGAAGCCCTTGCAGAATACGGAGCTAAGCATGCAAGACATGTTGGCAAAGTAGACGAAGCAATGGAGCTTAAAAGAACAGTGAGTGACATAAAGCATGAGGTGCAGTCACAACTCATACAAAATGAAACAACTCGTCGAAGGGTTTCTGGAATTGCCAAGGAACTGAAGAAACTTCATAGAGAAGCAGTTCAAAACACCATTAATTCAGTCACAGTGGTTGCTGTTCTTTTTGCCTCAATAGCCTTCTTGGCCATCTTCAATTTGCCGGGTCAATATCAAGTGAAACCTGGAGAAGAGATTGGAAAAGCTAATATAGCAGATCATCTTAGTTTCCAAGTTTTCTGCTTTCTGAATTCCACATCCCTTTTCATTTCTCTTGCAGTTGTGGTAGTTCAAATAACTTTGGTAGCCTGGGACACAAGGGCTCAAAAGCAGATTGTGTCAGTGGTTAACAAGCTGATGTGGGCTGCATGTGCTTGCACTTGTGGTGCTTTTCTAGCAATAGCTTTTGAGGTTGTTGGAGGGAAAACATGGATGGCTATCACCATAACCCTTTTGGGAGTACCTATTCTAGTAGGGACTCTGTTAAGCATGTGCTACTTTGTTTTTCGCCAACATTTTGGTATTTTCCGCAGTGATTCCCAGAGACGCATCAAGAGAGCAAGTGGAAGCAAATCTTTTTCATGGTCTTACTCTGCAAATATATCAGACTTGGATGATGAATACGATTCTGACATTGAGAAGATCTATGCCCTGTGA 1593 0.4256 MMESKGVRFLAYQSIFSSVGSGDFDGVKKLVEKVKNEEESSLSDVMSLQNDAGETALYIAAEHNLQEIFSYLLNLCDFEALKIRSKSDMNAFHVAAKRGHLDIVKELLNVWPELCKLCDSSNTSPLYSAAVQDHLDVVNAILDVDVSSMFIVRKNGKTSLHNAARYGLVRIVKAVIGRDPGIVCIKDRKGQTALHMAVKGQCTLVVEEILLADSSILNERDKKGNTALHMATRKCRSQIVILLLSYSAMDVNAINKQQETALDLADKLPYGDSALEIQEALAEYGAKHARHVGKVDEAMELKRTVSDIKHEVQSQLIQNETTRRRVSGIAKELKKLHREAVQNTINSVTVVAVLFASIAFLAIFNLPGQYQVKPGEEIGKANIADHLSFQVFCFLNSTSLFISLAVVVVQITLVAWDTRAQKQIVSVVNKLMWAACACTCGAFLAIAFEVVGGKTWMAITITLLGVPILVGTLLSMCYFVFRQHFGIFRSDSQRRIKRASGSKSFSWSYSANISDLDDEYDSDIEKIYAL* 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g3303 530 Pfam Ankyrin repeats (3 copies) 160 253 IPR002110 GO:0005515
Pvu2g3303 530 Pfam Ankyrin repeats (3 copies) 21 108 IPR002110 GO:0005515
Pvu2g3303 530 Gene3D - 147 304 IPR036770 -
Pvu2g3303 530 SMART ANK_2a 223 253 IPR002110 GO:0005515
Pvu2g3303 530 SMART ANK_2a 87 116 IPR002110 GO:0005515
Pvu2g3303 530 SMART ANK_2a 155 184 IPR002110 GO:0005515
Pvu2g3303 530 SMART ANK_2a 121 151 IPR002110 GO:0005515
Pvu2g3303 530 SMART ANK_2a 189 218 IPR002110 GO:0005515
Pvu2g3303 530 SMART ANK_2a 52 80 IPR002110 GO:0005515
Pvu2g3303 530 ProSiteProfiles Ankyrin repeat profile. 223 256 IPR002110 GO:0005515
Pvu2g3303 530 PANTHER PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 3 530 - -
Pvu2g3303 530 SUPERFAMILY Ankyrin repeat 15 286 IPR036770 -
Pvu2g3303 530 Gene3D - 13 146 IPR036770 -
Pvu2g3303 530 PANTHER ANKYRIN REPEAT PLANT-LIKE PROTEIN 3 530 - -
Pvu2g3303 530 Pfam Domain of unknown function 339 447 IPR026961 -
Pvu2g3303 530 ProSiteProfiles Ankyrin repeat region circular profile. 223 248 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g3303 Pvu-Chr2 48043674 48047394 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g3303 2 530 Miscellaneous Gene Families AT2G01680 69.944 0.0 735
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g3303 2 48043674 48047394 Pvu2g3303 2 48043674 48047394 ECH