Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g3290 ATGGGCGACATGAAAGACAAGGTTAAAGGGTTCATGAAGAAAGTGAACAACCCTTTCTCCTCTTCTTCATCTGGAAAATTCAAGGGCCAAGGTAGAGTCCTCGGTTCTTCTTCTACACCCGCCAATTCCAATCCTACCCCTCGCCCCATTCCTTCGCTCAACCCTAATTCCAAACCCTCTTCATCCAATCCCAATCCCAAACCCACTTCAGCCACTCCCAAACCCTCGCCCCACGATGCGGAGCCCAGTAGAAGCACCGAGAAGCCTCGCAAAGATGGTGGTGGGTTTGACCCGTTTGATTCGTTGGTCACTGATTCCAAAAGATCGCAGAACGGGTATTCACTGAACGTGTACGAATGTCCCGTTTGTAAACAACCCTTCGGATCCGAAGAAGCTGTGTCTGAACACGTGGATGGTTGTTTGAGCAACCTTGTTGAGCGTGAGCCTGTAGGTGATGATGGAAACGGGGTTTCAGAGAGTGAGGGTGGGTCTAACACTACTGGTGAATTGGAGGTTTGTGTTGGGACGTACATTTCAGGGAATCCTTCTGAGGGATCGGTTGATATTGTTCTCAAACTTTTGAGGAATATTGGTAGGGAACCTGAGAATGTGAAGTTTAGGAGGATCAGGATGAATAATCCCAAGATAAAAGAGGCTGTTGGTGATATTGCTGGGGGAGTCGAGTTGCTCAGTTTTCTGGGGTTTGAACTCAGGGAGGAGAATGGAGAGACATGGGCAGTGATGGAGGTTCCCAGAGAGGAGCAGATAAAATTCATCAAGGAGGCAATTGCGTTACTGGAATCACAACTTCTGCAACAACAACAAGGACCTCCTAAGGGAGAGGATGCAAATTCTGCGCAGAGGGGTGCGAAAGCCGAGCCAAAGCAAGTCGACAGACAGGTGAAGGTCTTCTTTGCTGTCCCTGAAAGTGTTGCAGCTAGAATTGAGCTACCAGATTCCTTCTATAAGCTTTCAGCGGAAGAGGTGAAAAGAGAAGCTGATTTAAGGAGAAAAAAGATTGCTGATTCTCAGCTTTTGATCCCCAAGTCACTTAAAGAAAAACAAGCAAAAGCCTCCAGGAAGAGATACACAAAAACTATTATTAGGATTCAATTTCCCGATGGAGTTGTACTTCAAGCCGTATTTGCTCCATGGGAACCAACCACTGCTCTCTATGAGTTTGTCAGCTCAGCACTAAAAGAACCAGGTTTGCAATTTGACCTAATGCATCCTGTAGTTGTCCAACGGCGTGTGATCCCTCGTTTTCCAAAAGCAGGGGATAATGCTAAAACAATAGAGGAAGAGGACCTGGTACCTTCAGCTTTAATTAAGTTCAAGCCCTTGGAAACAGATTCTGTTGTTTTCACCGGTCTCAAAAATGAATTGCTTGAAATCAGTGAACCACTTGTTAATGGTTAA 1419 0.4602 MGDMKDKVKGFMKKVNNPFSSSSSGKFKGQGRVLGSSSTPANSNPTPRPIPSLNPNSKPSSSNPNPKPTSATPKPSPHDAEPSRSTEKPRKDGGGFDPFDSLVTDSKRSQNGYSLNVYECPVCKQPFGSEEAVSEHVDGCLSNLVEREPVGDDGNGVSESEGGSNTTGELEVCVGTYISGNPSEGSVDIVLKLLRNIGREPENVKFRRIRMNNPKIKEAVGDIAGGVELLSFLGFELREENGETWAVMEVPREEQIKFIKEAIALLESQLLQQQQGPPKGEDANSAQRGAKAEPKQVDRQVKVFFAVPESVAARIELPDSFYKLSAEEVKREADLRRKKIADSQLLIPKSLKEKQAKASRKRYTKTIIRIQFPDGVVLQAVFAPWEPTTALYEFVSSALKEPGLQFDLMHPVVVQRRVIPRFPKAGDNAKTIEEEDLVPSALIKFKPLETDSVVFTGLKNELLEISEPLVNG* 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g3290 472 SUPERFAMILY PUG domain-like 182 272 IPR036339 -
Pvu2g3290 472 MobiDBLite consensus disorder prediction 271 295 - -
Pvu2g3290 472 SUPERFAMILY Ubiquitin-like 337 445 IPR029071 -
Pvu2g3290 472 MobiDBLite consensus disorder prediction 1 107 - -
Pvu2g3290 472 CDD PUB 183 263 - -
Pvu2g3290 472 PANTHER PLANT UBX DOMAIN-CONTAINING PROTEIN 2 1 471 - -
Pvu2g3290 472 MobiDBLite consensus disorder prediction 147 168 - -
Pvu2g3290 472 ProSiteProfiles UBX domain profile. 361 445 IPR001012 GO:0005515
Pvu2g3290 472 MobiDBLite consensus disorder prediction 15 43 - -
Pvu2g3290 472 Pfam UBX domain 362 441 IPR001012 GO:0005515
Pvu2g3290 472 MobiDBLite consensus disorder prediction 80 95 - -
Pvu2g3290 472 Gene3D - 179 268 - -
Pvu2g3290 472 Gene3D - 355 448 - -
Pvu2g3290 472 SMART PGNneu 185 252 - -
Pvu2g3290 472 Pfam PUB domain 184 258 IPR018997 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g3290 Pvu-Chr2 47958567 47962485 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g3290 1 393 C2H2 Transcription Factor Family AT2G01650 54.167 1.59e-141 409
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g3290 2 47958567 47962485 Pvu2g3290 2 47958567 47962485 ECH