Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1897 ATGGAGATCTATAAGTGGCCAACTAATATGCTTAAAGAAGTTGATAGAGGGATCAGACCTAACATTAATGAGTGGTATGATACTATTTTGGATAGTACTCGTTGGATTTTGGCTAATGATTTCTGTCTCTCTCATCTTTCTCTCTCCGGAAGGGCAAACCCTAAAGACCGTTTGCACCCACCAATTGTCATGGATGATGATGTGTTGAACATGCCCAATTGGGGTTATTATGAACCCTTCAGAGGGGGACATCTTGGTCTGCAGCTCATGCCTGGTATGACTGATCGAGACACAAAGCCATATTTGCCTGCTCGTGATCCAGCTCTGTTAATGGGTGCTAATGGAACTTTTCACCCTCGGGATTGCGTTGTTTCCGAAGCACCAATGCAGTTGAACTATGTCAGAGATAATTGGACAAGCCAAAGGGATAGGTATTTCAATATGCAGCAGCCCACAAATCCTAATTATGCTGTTCTTCCAGAAACATCAGTAGCTCCCTACTTGCAAATTATACAACCACCCGATACATCGAGAGATGAGAAAGTGGACAGAATTGAAGAGTTAGTTGTCAAAAAGGAAGGTGGTCAGTCGAAGAAGAGGCAGACCAAGGGAGCTCTAACGACTCCACAAGCTAAGAAACCTAGGAAGCCGAAGGATAATAGCAATGTTCCAGTTCAACGTGTGAAGCCCCCGAAGAAGACTATGGAGCTTGTAATTAATGGAATTGATATGGACATTTCTGGTCTACCCATTCCAGTTTGTTCGTGTACCGGGAGTCCTCAGCAGTGTTATCGTTGGGGTTGTGGAGGTTGGCAATCGGCCTGTTGCACCACAAATGTGTCGATATATCCTTTGCCAATGAGCATGAAAAGGCGTGGTGCTAGGATAGCTGGGAGGAAAATGAGCCAAGGTGCTTTTAAAAAGGTTTTAGAGAAACTTGCGGCTGAAGGTTATAATTTTGCTAACCCTATTGATCTGAAGACTCATTGGGCTAGACATGGCACCAACAAGTTTGTTACTATCAGGTAG 1029 0.4402 MEIYKWPTNMLKEVDRGIRPNINEWYDTILDSTRWILANDFCLSHLSLSGRANPKDRLHPPIVMDDDVLNMPNWGYYEPFRGGHLGLQLMPGMTDRDTKPYLPARDPALLMGANGTFHPRDCVVSEAPMQLNYVRDNWTSQRDRYFNMQQPTNPNYAVLPETSVAPYLQIIQPPDTSRDEKVDRIEELVVKKEGGQSKKRQTKGALTTPQAKKPRKPKDNSNVPVQRVKPPKKTMELVINGIDMDISGLPIPVCSCTGSPQQCYRWGCGGWQSACCTTNVSIYPLPMSMKRRGARIAGRKMSQGAFKKVLEKLAAEGYNFANPIDLKTHWARHGTNKFVTIR* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1897 342 SMART GAGA_bind_2 64 342 IPR010409 -
Pvu2g1897 342 PANTHER - 64 342 IPR010409 -
Pvu2g1897 342 MobiDBLite consensus disorder prediction 190 230 - -
Pvu2g1897 342 Pfam GAGA binding protein-like family 64 342 IPR010409 -
Pvu2g1897 342 PANTHER PROTEIN BASIC PENTACYSTEINE2-LIKE 64 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1897 Pvu-Chr2 33771818 33778157 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g1897 64 342 BBR or BPC Transcription factor family AT2G01930 56.040 8.36e-104 304
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Pvu2g1897 GAGA_bind 1.2e-102 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1897 2 33771818 33778157 Pvu2g1897 2 33771818 33778157 ECH