Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu2g1823 ATGACACTTCTCTCCAACAACATGGACAATGGTTGCTTCTCTTCGCCACGCCATGAGGCTTTTCCGGCTGGTCTGCGAGTTCTCGTTGTGGATGATGATCCAACATGGTTGAGGATCCTTGAAAAGATGCTCAAGAAGTGCTTGTATGAAGTGACTACATGTTGTTTAGCAATAGAGGCTCTGAAAAAACTTCGTGAAAGGAAAGATGCATATGACATAGTGATCAGCGATGTCAATATGCCTGACATGGATGGTTTCAAACTTCTTGAGCAAGTTGGACTTGAGATGGATCTTCCTGTCATTATGATGTCTGTTGATGGAGAAACCAGCAGGGTGATGAAAGGTGTCCAACATGGTGCATGTGATTATCTCCTCAAGCCTATAAGGATGAAAGAACTGAGAAACATATGGCAACACGTCTTTAGAAAAAGGATGCATGAAGCAAGAGATTTTGAAAGCCATGAGGGTTTTGAAGCCCTTCATTTGATGATGAATGGATCAGATCAGTCCGATGATGGTAACCTGTTTGCTGTAGAAGAAATTACCTCAATAAAGAAAAGAAAAGATGCAGATAACAAACACGACGATAAAGAATTTGGAGATCATTCTCCCTCAAAGAAAGCTAGGGTTGTTTGGTCTGTGGACCTTCATCAGAAATTTGTCAAAGCAGTGAATCAAATTGGATTTGATAAAGTTGGTCCCAAGAAAATTCTTGATTTGATGACTGTTCCCTGGTTGACTAGAGAAAACGTTGCTAGTCACTTGCAGAAATACAGGCTCTACTTGAGTAGATTGCAAAAGGAAAATGATCAGAAATCTTCCTCAAGTGGAATAAAGCATTCGGATTCACCTTCAAAAGATCCAGGAAGTTTTAGTTTGCTAAACACTGCAAACAACAAGCAACAAAATGATGTTGCCATTGACAGCTTCAGTCATTCAGATGGAAGTTTACTATTTCAGATGGATGCTCCAAGTCATGAAGGTGATCTGAAGGGAGTCGTGTCAGAGCCTACAACCGAAAAAAGTAGAACACCACCAAAAAGTTCACAGATGAGCCTCAATCAACCCTTTTCATCTTTAGAGTCATCAGAAGCAAGCCATGCAGTATTTGATTGCACCATACCAACACGGTACTCTTGGGGTGAGTTTCCAAAAGGACCACTCAAAGAAGAACAGAAGGCAATTGTTCAATTAGAGGATAGCTTCAGCCAATTGCCATTAAATGGTACAAGGCAGCACATTCAGGTTGATCAATCACAATCGATTGCTTCGATTAATTCTAATCCTTCTATAACAGAAGAAGAGGTTGCCCCCAGCTTAGACATCAAACCTTTATATGCTGGTTACAAGAATGATTATGTGAGTCCTGTGAGTTCAATAGGATCTGCAGTTGACACCTTTCCTAATCAGTCCAAAAGCCTCATTGTGAGTGATGAATCTTCAGAGCCCATTTTCACCTCAAATTTGGGCTTGAAAACTCACGGATTTGATCTAGATTGCATTTCTGATCTGGATTTTTACCAAAGGAATCTATTATTGGGTGGTGAGGCAGCTTCTGCACCTTTGGAGGACGACCTGAATTTCTTTTTGCTGCAAGCTGATTGGTACAACATGAATTTTGGGCAGCAGAATATAAATATGTCAGAATGTTATGATCCAAGGCTTGTTGCTGAAGCCCCTAGCTACTTTTATGATTCTTCAGATTATTCATCGGTAGATCAAAGTCTATTCATAGCATGA 1740 0.404 MTLLSNNMDNGCFSSPRHEAFPAGLRVLVVDDDPTWLRILEKMLKKCLYEVTTCCLAIEALKKLRERKDAYDIVISDVNMPDMDGFKLLEQVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVFRKRMHEARDFESHEGFEALHLMMNGSDQSDDGNLFAVEEITSIKKRKDADNKHDDKEFGDHSPSKKARVVWSVDLHQKFVKAVNQIGFDKVGPKKILDLMTVPWLTRENVASHLQKYRLYLSRLQKENDQKSSSSGIKHSDSPSKDPGSFSLLNTANNKQQNDVAIDSFSHSDGSLLFQMDAPSHEGDLKGVVSEPTTEKSRTPPKSSQMSLNQPFSSLESSEASHAVFDCTIPTRYSWGEFPKGPLKEEQKAIVQLEDSFSQLPLNGTRQHIQVDQSQSIASINSNPSITEEEVAPSLDIKPLYAGYKNDYVSPVSSIGSAVDTFPNQSKSLIVSDESSEPIFTSNLGLKTHGFDLDCISDLDFYQRNLLLGGEAASAPLEDDLNFFLLQADWYNMNFGQQNINMSECYDPRLVAEAPSYFYDSSDYSSVDQSLFIA* 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu2g1823 579 CDD REC_typeB_ARR-like 27 141 - -
Pvu2g1823 579 MobiDBLite consensus disorder prediction 269 295 - -
Pvu2g1823 579 Gene3D - 25 196 - -
Pvu2g1823 579 Gene3D - 204 266 - -
Pvu2g1823 579 MobiDBLite consensus disorder prediction 337 358 - -
Pvu2g1823 579 SUPERFAMILY CheY-like 24 152 IPR011006 -
Pvu2g1823 579 Pfam Myb-like DNA-binding domain 209 259 IPR001005 -
Pvu2g1823 579 SMART REC_2 25 137 IPR001789 GO:0000160
Pvu2g1823 579 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 207 260 IPR006447 GO:0003677
Pvu2g1823 579 Pfam Response regulator receiver domain 27 136 IPR001789 GO:0000160
Pvu2g1823 579 PANTHER TWO-COMPONENT RESPONSE REGULATOR 10 554 - -
Pvu2g1823 579 MobiDBLite consensus disorder prediction 327 358 - -
Pvu2g1823 579 SUPERFAMILY Homeodomain-like 205 264 IPR009057 -
Pvu2g1823 579 ProSiteProfiles Response regulatory domain profile. 26 141 IPR001789 GO:0000160
Pvu2g1823 579 PANTHER TWO-COMPONENT RESPONSE REGULATOR 10 554 IPR045279 GO:0009736
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu2g1823 Pvu-Chr2 32829922 32834360 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu2g1823 19 273 Response Regulator Gene Family AT2G25180 54.104 7.29e-81 263
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Pvu2g1823 Response_reg 6.6e-24 CL0304
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1823 2 32829922 32834360 Pvu2g1823 2 32829922 32834360 ECH
Pvu1g2663 1 51391199 51395335 Pvu2g1823 2 32829922 32834360 PCT