Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu1g2376 ATGGCGAAAACAAAACAAACCCTAACCCTCTTGTTAATCTTATTCTCTTTGGCCTCCTTCTTCGTTCTTGCTTTATCCTCTGCCGCGGACTTCTTCCTCTACGGCGGCTGCACGCAGCAACGGTACACCTCCAACTCGCCCTACGAGTCAAACCTGAACTCGCTCCTCACCTCGCTGGTCAACTCGGCCACGTACTCCTCCTACAACAACCTCACCGTGGTGAGCTCCAGCCAGAGCGACATCGCCTACGGCCTCTACCAGTGCCGCGGCGACCTCGCTATGCCGGACTGCGCCGCCTGCGTTGCCCGCGCCGTCGCTCGAGCAGGCCAGCTCTGCCCGGCGGCGTGTGGCGGCGCGGTGCAGCTCGACGGCTGCTTCGTGAAGTACGACAACTCCACGTTCCTGGGCGTAGAGGACAAGACGGTGGTGCTGAAGAGGTGTGGGCCCTCCCTGGGGTTCGGGTCGGGCGCGACGGGCGAGAGAGATGCAGTGTTGGGCGGATTAACGGGTTCGGGTGGATTTTTTCGGGTTGGCGGGTCGGGTGAGGTGAAGGGCGTGGCGCAGTGTTGTGGGGATTTGAGTTTTGCGGAGTGTCAGGATTGTGTGGGGGATGCGATCCGACGGCTGAGGAGTGAGTGTGTTGCTGCGGACTATGGGGATGTGTTCTTGGGAAAATGTTACGCCAGGTTCTCCACCAATGGGGCTCATGCTTACAACAATAAGGCCCATGGAAAATCAGACAATGAAGGTGAAAAAACATTTGCAATAATTGTTGGATTATTAGCAGGAGTGGCTATACTCATTATTTTCCTTGCATTCTTGAGAAGGATTTGTGAGGGACAGGGTAAATAA 852 0.5634 MAKTKQTLTLLLILFSLASFFVLALSSAADFFLYGGCTQQRYTSNSPYESNLNSLLTSLVNSATYSSYNNLTVVSSSQSDIAYGLYQCRGDLAMPDCAACVARAVARAGQLCPAACGGAVQLDGCFVKYDNSTFLGVEDKTVVLKRCGPSLGFGSGATGERDAVLGGLTGSGGFFRVGGSGEVKGVAQCCGDLSFAECQDCVGDAIRRLRSECVAADYGDVFLGKCYARFSTNGAHAYNNKAHGKSDNEGEKTFAIIVGLLAGVAILIIFLAFLRRICEGQGK* 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu1g2376 283 Gene3D - 29 134 IPR038408 -
Pvu1g2376 283 Gene3D - 159 234 IPR038408 -
Pvu1g2376 283 Pfam Salt stress response/antifungal 176 232 IPR002902 -
Pvu1g2376 283 Pfam Salt stress response/antifungal 37 131 IPR002902 -
Pvu1g2376 283 ProSiteProfiles Gnk2-homologous domain profile. 30 134 IPR002902 -
Pvu1g2376 283 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 7 279 - -
Pvu1g2376 283 PANTHER PLASMODESMATA-LOCATED PROTEIN 5 7 279 - -
Pvu1g2376 283 ProSiteProfiles Gnk2-homologous domain profile. 135 235 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu1g2376 Pvu-Chr1 49099481 49101449 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu1g2376 73 272 Receptor kinase-like Gene Family AT1G70530 29.358 1.27e-15 74.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2376 1 49099481 49101449 Pvu8g2452 8 55117491 55119451 PCT