Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1707 GAGGATGAAATAGAGGACATTCAAAAGGAAATTTCTGTTCTGTCACAATGTCGATCTGCATACATTACTGAGTATTATGGTTCCTTTCTTAATCAAACTAAACTTTGGATAATAATGGAATACATGGCTGGAGGCTCTGTTGCTGATCTACTGCAATCAGGTCCCCCACTTGATGAAATGTCAATTGCTTGCATTCTACGGGATTTACTTCATGCAATTGATTACCTACATACTGAAGGAAAAATTCATAGAGACATTAAAGCTGCAAACATTTTATTAACTGAGAATGGTGATGTAAAGGTTGCTGATTTTGGTGTTTCTGCACAGTTAACTAGAACCATATCAAGGAGAAAGACCTTTGTAGGAACACCATTTTGGATGGCACCCGAGGTTATTCAAAATTCAGAAGGATATAATGAAAAGGCAGATATCTGGTCTCTGGGGATTACTGCAATAGAGATGGCAAAAGGGGAGCCTCCCCTTGCGGATCTTCATCCAATGAGAGTGCTTTTCATCATACCTCGAGAGAATCCACCACAACTAGATGAACATTTTTCTCGCTATATGAAAGAATTTGTTTCATTGTGCTTGAAGAAGGTTCCTGTTGAGAGGCCAAGTGCTAAAGAGCTTCTTAGACATCGTTTCATTCGGAATGCCAGGAAGAGTCCTAAGCTATTGGAGAGAATACGGGAGCGTCCAAAGTTCCAAATAAAGGAAGATGAGGCAACACCTAGAAATGCCCCAAGGGGGATGGGGGAGGCATCTGATACTATTAAGGTTGCGAAAGATTTAAGGGGTGATGACACTAATCAGCCTAGTGGCCAAGGTAAAACCCTGAAAAGTTCTGGGTGGGACTTCAGCATTAGTGGATCTCAGGGTACTGGAACCTTTCGTAGTGTGTCACGACCACCTCAGTTTAGAGATAAGAAAACTGAAGTTTCAAATCATCAGCTTACCCCAAAAAAAAGTCCTGAGAGTGGCTATCATGGAGGATCTGGCAATAAAAACGAGTTGCTAGAGACTTCTTTTGGAAAAGATTTGGGAGTTCCCTACCATGATGAACATCTGGATAATCATCTTGAAGATGATGAGTTGTTTGGGAATGGATTAGGAACTGTTGTTGTTCGGTCTCCAAAAGGACTACAGTCATCACTGTTTCGTGACCAAAGCTCTCGATCTAGCAGCAGCTATGCTTCTTTTGAAGATGTTTCTACTGGCGGAACTGTTGTTTTGCGTAGTCATCACGATGATTCTGATTCTCCACAGACCCCAAGGTCCCGACTGGGACATAATAGCAGAAATTCAAATGCCTCATTTGAAGATAGTGCTACAAATCTTGCTGAGGCAAAGGCTGCTATCCAAGGTGGATGGAGGAAAATGAATGTCCGGGATAGATTTGCACTGGGAAAACTTAACAATGATGTACAGGAAAGCAGGAGAGAACATATGTCAACCAGCTCTGATTCTTCCAGACCATCTCGTGAATCCATTGATACACAAAAGGGGAATTCAAGATCACAGTTTGCTATCGATGATGAAGAAAGTGCCAAAATAATCTCATCCTCTGCGCCCTTATCTGTTTTGCTTATTCCTTCATTAAAAGAGGCCACTGCTGAGGATCCAGAAGGGCCACTTATGCAAATTGTTATCAATGCTCTTGTAAACATGGAGAGGACAAAGCCCCAATCCTGTGACGCTCTTGTCAAAAATTTGCTTCAGCGTTTGGCAAGTTCAAAGGAATTATCATTGAAGGACCTGCAAGAACTGGCTGGTCGAATACTAAGCAAGACTAAGTCAGCTGAAGAAACCCGAAATGCAGAGACGGATCACAAGAAGAAACAAAACAAGGAACTTCATTCAAATAGCAATTTAAGCCCCCTCGCAAGATTTCTTCTCTCAAGATGGCAAGGACAAACCTCACGGGATCTAAGTTCATCATGA 1941 0.4189 EDEIEDIQKEISVLSQCRSAYITEYYGSFLNQTKLWIIMEYMAGGSVADLLQSGPPLDEMSIACILRDLLHAIDYLHTEGKIHRDIKAANILLTENGDVKVADFGVSAQLTRTISRRKTFVGTPFWMAPEVIQNSEGYNEKADIWSLGITAIEMAKGEPPLADLHPMRVLFIIPRENPPQLDEHFSRYMKEFVSLCLKKVPVERPSAKELLRHRFIRNARKSPKLLERIRERPKFQIKEDEATPRNAPRGMGEASDTIKVAKDLRGDDTNQPSGQGKTLKSSGWDFSISGSQGTGTFRSVSRPPQFRDKKTEVSNHQLTPKKSPESGYHGGSGNKNELLETSFGKDLGVPYHDEHLDNHLEDDELFGNGLGTVVVRSPKGLQSSLFRDQSSRSSSSYASFEDVSTGGTVVLRSHHDDSDSPQTPRSRLGHNSRNSNASFEDSATNLAEAKAAIQGGWRKMNVRDRFALGKLNNDVQESRREHMSTSSDSSRPSRESIDTQKGNSRSQFAIDDEESAKIISSSAPLSVLLIPSLKEATAEDPEGPLMQIVINALVNMERTKPQSCDALVKNLLQRLASSKELSLKDLQELAGRILSKTKSAEETRNAETDHKKKQNKELHSNSNLSPLARFLLSRWQGQTSRDLSSS* 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1707 646 MobiDBLite consensus disorder prediction 382 403 - -
Pvu11g1707 646 Gene3D Transferase(Phosphotransferase) domain 1 1 249 - -
Pvu11g1707 646 SUPERFAMILY Protein kinase-like (PK-like) 2 252 IPR011009 -
Pvu11g1707 646 MobiDBLite consensus disorder prediction 474 488 - -
Pvu11g1707 646 MobiDBLite consensus disorder prediction 424 442 - -
Pvu11g1707 646 MobiDBLite consensus disorder prediction 597 618 - -
Pvu11g1707 646 MobiDBLite consensus disorder prediction 597 623 - -
Pvu11g1707 646 MobiDBLite consensus disorder prediction 489 506 - -
Pvu11g1707 646 MobiDBLite consensus disorder prediction 473 510 - -
Pvu11g1707 646 Pfam Protein kinase domain 5 216 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu11g1707 646 MobiDBLite consensus disorder prediction 268 301 - -
Pvu11g1707 646 SMART serkin_6 1 216 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu11g1707 646 MobiDBLite consensus disorder prediction 382 442 - -
Pvu11g1707 646 CDD STKc_MST3_like 1 236 - -
Pvu11g1707 646 ProSiteProfiles Protein kinase domain profile. 1 216 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu11g1707 646 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 644 - -
Pvu11g1707 646 PANTHER STERILE20-LIKE KINASE, ISOFORM B-RELATED 1 644 - -
Pvu11g1707 646 MobiDBLite consensus disorder prediction 229 246 - -
Pvu11g1707 646 MobiDBLite consensus disorder prediction 229 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1707 Pvu-Chr11 43216203 43226680 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1707 8 643 MAP Kinase Kinase Kinase Kinase AT3G15220 61.659 0.0 761
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-YSK Pvu11g1707 Pkinase 6.1e-55 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g1707 11 43216203 43226680 Pvu11g1707 11 43216203 43226680 ECH