Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1706 ATGGAGTTCTTCTTGACTCCTTCTAAAGTTTTTCGGTTTGGGAGGATCTTGATGGAAGGAGAAGACATGGAAGCGGAAGGAATGATTAAAATGGGTCAAAGGTGGATTTGGAACAAAGGGTGTTCAGAAGCCAATTTGACCTCTAAGTTTTGGGCTGAAAAGATAGAAAAAGAGAAACCATTAAGGGAAGACGATGAATTAGTTCAAACCTTCAAGAGATGGAGACGTCCTCCTAAAACTGGAGTAAAAACCAATAAGATGACCTCCAAAACAAGACAACCCAAGAAAAAAAACCAAACCAAAACCCTAAATCCTCAAATTCGATCGAAATCGTTCTCTGGAGTCTCCTTCTTCCAATCCAAACTAGAAGAAATCCCTAAATCCCGAGATTGGATCGATTTTGCGCGGAAAGGTGTTGAGAAAATGTCTGGTCGTGGCAAGGGAGGAAAGGGATTGGGCAAAGGAGGTGCGAAGAGGCACAGGAAAGTGCTTCGCGACAACATTCAGGGCATAACGAAACCGGCGATTCGGCGATTGGCGAGAAGAGGTGGTGTGAAGAGGATCAGTGGATTGATCTACGAGGAGACGAGGGGAGTGCTGAAGATATTCTTGGAGAATGTGATTCGCGACGCTGTGACCTACACCGAGCACGCCAGGAGGAAGACGGTTACGGCCATGGACGTTGTGTATGCGCTGAAGAGGCAGGGAAGAACCCTCTATGGTTTTGGAGGTTGA 735 0.4612 MEFFLTPSKVFRFGRILMEGEDMEAEGMIKMGQRWIWNKGCSEANLTSKFWAEKIEKEKPLREDDELVQTFKRWRRPPKTGVKTNKMTSKTRQPKKKNQTKTLNPQIRSKSFSGVSFFQSKLEEIPKSRDWIDFARKGVEKMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG* 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1706 244 PRINTS Histone H4 signature 146 157 IPR001951 GO:0003677|GO:0030527
Pvu11g1706 244 PRINTS Histone H4 signature 161 180 IPR001951 GO:0003677|GO:0030527
Pvu11g1706 244 PRINTS Histone H4 signature 181 201 IPR001951 GO:0003677|GO:0030527
Pvu11g1706 244 PRINTS Histone H4 signature 203 217 IPR001951 GO:0003677|GO:0030527
Pvu11g1706 244 PRINTS Histone H4 signature 218 230 IPR001951 GO:0003677|GO:0030527
Pvu11g1706 244 PRINTS Histone H4 signature 230 241 IPR001951 GO:0003677|GO:0030527
Pvu11g1706 244 SMART h44 157 231 IPR001951 GO:0003677|GO:0030527
Pvu11g1706 244 Pfam Centromere kinetochore component CENP-T histone fold 182 237 IPR035425 -
Pvu11g1706 244 CDD H4 159 242 IPR001951 GO:0003677|GO:0030527
Pvu11g1706 244 Gene3D Histone, subunit A 143 244 IPR009072 GO:0046982
Pvu11g1706 244 ProSitePatterns Histone H4 signature. 156 160 IPR019809 GO:0000786|GO:0003677
Pvu11g1706 244 MobiDBLite consensus disorder prediction 75 106 - -
Pvu11g1706 244 PANTHER HISTONE H4 91 244 - -
Pvu11g1706 244 SUPERFAMILY Histone-fold 144 243 IPR009072 GO:0046982
Pvu11g1706 244 PANTHER HISTONE H4 91 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1706 Pvu-Chr11 43210633 43213480 Dispersed/Proximal