Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1702 ATGAGAGGAGGTCTCCCTCTTCTCCATTTGGCAAGTCAATCTGGAGATATAAAGTTTTTAAATGTGCTTCTCAAAACTTGTCCAAATTCAGTAAAAGATTTGACCGTTAGAAATGAGATTGCATTGCATTTTGCTGTTATACACGACAAGTTTGAGACTTTTGACTGTTGGGTTATTCTGAAGCAGGAAGATGTGGAGGGCAACACCATTTTACACATTGCAGCAACAAAAGATGACACGGAGGCAATGAGATGGTTGATAGAGGAGATGTCAGATCTAAATGCTGAAAATTTGATAGGCATTTGA 306 0.3856 MRGGLPLLHLASQSGDIKFLNVLLKTCPNSVKDLTVRNEIALHFAVIHDKFETFDCWVILKQEDVEGNTILHIAATKDDTEAMRWLIEEMSDLNAENLIGI* 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1702 101 SUPERFAMILY Ankyrin repeat 5 99 IPR036770 -
Pvu11g1702 101 Gene3D - 2 100 IPR036770 -
Pvu11g1702 101 ProSiteProfiles Ankyrin repeat region circular profile. 66 97 - -
Pvu11g1702 101 Pfam Ankyrin repeats (3 copies) 8 96 IPR002110 GO:0005515
Pvu11g1702 101 PANTHER HOMEOBOX PROTEIN WARIAI 2 99 - -
Pvu11g1702 101 ProSiteProfiles Ankyrin repeat profile. 66 98 IPR002110 GO:0005515
Pvu11g1702 101 SMART ANK_2a 3 33 IPR002110 GO:0005515
Pvu11g1702 101 SMART ANK_2a 66 95 IPR002110 GO:0005515
Pvu11g1702 101 PANTHER ANKYRIN REPEAT FAMILY PROTEIN 2 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1702 Pvu-Chr11 43128850 43129986 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1702 2 101 Miscellaneous Gene Families AT5G54610 32.759 6.56e-16 69.7