Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1701 ATGGTTTATCATAATGGACAAAGAACGAGCCAAAATGAGAGGAGGTGGCTCAGGACAAATACTATTGAGTTGCAAACCATTCTGAACCAGAGAGACGTGGAGGGCAACACCATTTTACACATTGCAGCAACGAAAAATGATACCAAGACAATGAAATTGTTGATAAAGGTGATGACAGATATAGATGCTGCAAATTCGAGTGGTGAAAGGGCAATTGATATAATAGAGAACCAAGAAATTAAAAAGAATTTGGAGAGGGCTGAAGCAAGAGTTAAGAGATTTAGAAAAGTGCTTTCGTTAATGGTATCAATGAATGAATGGATAATTCGAAAAACTGGAATGAAAGAGAAAATGTCGAATGAGATACGAAACGCGTACATGATAGTGGCTACTCTTATTGCAACCACAACTTATCAAGCAGTATGGAGTCCACCTGGTGGATTTCGTCAAATTAATGCAGTTGGAACTAATAACACTGTAATTCAAGATCACGGGCCATCAAATTCATCCAAATTTTATGAAGGGAAATCAGTGATGTCAGAAACCAAGTTTATGCCATTTTCAACCACAAATGCGTGGGCCTTTATGACCGCCATTATCACAATTATTTTGCTGATGCCTAGGAATGTGGGATGGTTTCTATTGTATCTGCCAACATGGCTCCTTGTAATGAGCTACTCCGTCTCTATTATGGTCATATCTCCCAGTGATATCACTGCAAACCTCATGACTTCCTTTTACCTAGTCCTTCTTGTAGTATTGATTTTGGCTTGTCTTTTATTTTTCAAACGTTCACTAATGTAA 804 0.3806 MVYHNGQRTSQNERRWLRTNTIELQTILNQRDVEGNTILHIAATKNDTKTMKLLIKVMTDIDAANSSGERAIDIIENQEIKKNLERAEARVKRFRKVLSLMVSMNEWIIRKTGMKEKMSNEIRNAYMIVATLIATTTYQAVWSPPGGFRQINAVGTNNTVIQDHGPSNSSKFYEGKSVMSETKFMPFSTTNAWAFMTAIITIILLMPRNVGWFLLYLPTWLLVMSYSVSIMVISPSDITANLMTSFYLVLLVVLILACLLFFKRSLM* 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1701 267 PANTHER ANKYRIN REPEAT FAMILY PROTEIN 15 255 - -
Pvu11g1701 267 Coils Coil 77 97 - -
Pvu11g1701 267 ProSiteProfiles Ankyrin repeat region circular profile. 34 65 - -
Pvu11g1701 267 Pfam Domain of unknown function 119 221 IPR026961 -
Pvu11g1701 267 ProSiteProfiles Ankyrin repeat profile. 34 66 IPR002110 GO:0005515
Pvu11g1701 267 Gene3D - 21 103 IPR036770 -
Pvu11g1701 267 SUPERFAMILY Ankyrin repeat 26 79 IPR036770 -
Pvu11g1701 267 SMART ANK_2a 34 63 IPR002110 GO:0005515
Pvu11g1701 267 PANTHER HOMEOBOX PROTEIN WARIAI 15 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1701 Pvu-Chr11 43115802 43117283 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1701 7 256 Miscellaneous Gene Families AT1G14500 26.259 9.61e-20 86.3