Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1694 ATGGCTTCAAACATCAACATAACAATTGATAACAAATTCAAAGAAGCTGCGAGAGATGGAGATATAAACCTTCTCTACACAGTAATTGAGGAGGATCCACATGTTTTGGAACACAAAGATTCAATACCATTTGTTGAGACACCTTTGCATGTTGCTGCATCATTTGGTAATATAGGGTTTGCCACTGAGATCATGAGGCTGAAACCTTCATTTGCTTGGAAGCTAAATCAACAGGGTTTCACACCTATCCACCTTGCTATGCAACACAACCATAAGAGAATGGTGCTTCGCTTTGTAGGCATCAACAAAGAATTGGTTCGAGCCAAAGGGAGAGAAGGTTTCACTCCTTTGCATTTTGCAACTCAGATCGGAGAAATTGATCTTTTGGCTAAGTTCCTCATGGCTTGTCCAGAATCCATTGAAGATGTGAGTGTTAGATGTGAAACTGCACTTCATATTGCAGTGAGGTTTCAACAATATGAGGCTCTTCAAGTCCTGGTTGGATGGCTGAAGAGAACATGTCAGATGAGTGCCATGCAGATAGAAAAAACAGTGTTGAACTGGAAAGATGAGTCAGGTAACACCATTCTGCATGTTTCAGCCCTCATCAGTGACTCAAAGGCGCTTCGATTGTTGACGAAGACTAAAATTGATTTGAAGGCCAAGAATTTGGAAAACTCAACAGCACTGGACATAGCAGGTAGTGCAGAGATAAAGAACGTCTTAGTGAGGGCTGGTGCAAAACATGGTTCATCAGTTACTGATTCTCCAACCATTGCGGAAAAACAAAAGTTGAATATCACAGTTGCAGAGAAAATAATGATATTTGTAATTCGTATCAGAAGGGATATAACAGAAGACCAACGCCAGACTTTTCTTATAGTTGCTGCTCTCATTGCCACTGCTACCTATCAATCAGCACTAAGCCCCCCAGGTGGAGTTTATCAGGCTAATTTAGAGAATAATATCAGTAATGTTAGCATCAGTTCCATCAGTTCTAGAACTTCTGCTGGTACCCAAAGGAATGCTGGAACTTCTGTCATGTCTGAAGGTGATTTCATGACCTTATCCATTTTGAATTCACTTTCTCTTTTGGTTTCAACAGTGGCAATCTGTATTTTGACGCCAAGTGGGATAGTGGGTGGTATACTGTTAACGCCATTGATTTGGTTTGCCTACTGCTATCTGTATTCTATGAAGGTGATATCCCCCACTAATGCTACCTCAATTGTGAATTTGGTTATGGTTTGTTTATTCCCTTCCGTGCACTCTGGAGTGTGCTGGGCATTTTCTTCAGTGTATCAGAGAGTTAAGTGTCGTGAAGACAACAGGGAAATTGAAACAAGGAATGGTGCAACCGGAAGAAACATATGGTAA 1377 0.4096 MASNINITIDNKFKEAARDGDINLLYTVIEEDPHVLEHKDSIPFVETPLHVAASFGNIGFATEIMRLKPSFAWKLNQQGFTPIHLAMQHNHKRMVLRFVGINKELVRAKGREGFTPLHFATQIGEIDLLAKFLMACPESIEDVSVRCETALHIAVRFQQYEALQVLVGWLKRTCQMSAMQIEKTVLNWKDESGNTILHVSALISDSKALRLLTKTKIDLKAKNLENSTALDIAGSAEIKNVLVRAGAKHGSSVTDSPTIAEKQKLNITVAEKIMIFVIRIRRDITEDQRQTFLIVAALIATATYQSALSPPGGVYQANLENNISNVSISSISSRTSAGTQRNAGTSVMSEGDFMTLSILNSLSLLVSTVAICILTPSGIVGGILLTPLIWFAYCYLYSMKVISPTNATSIVNLVMVCLFPSVHSGVCWAFSSVYQRVKCREDNREIETRNGATGRNIW* 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1694 458 Pfam Domain of unknown function 285 377 IPR026961 -
Pvu11g1694 458 SMART ANK_2a 192 221 IPR002110 GO:0005515
Pvu11g1694 458 SMART ANK_2a 146 176 IPR002110 GO:0005515
Pvu11g1694 458 SMART ANK_2a 112 142 IPR002110 GO:0005515
Pvu11g1694 458 SMART ANK_2a 78 107 IPR002110 GO:0005515
Pvu11g1694 458 SMART ANK_2a 44 73 IPR002110 GO:0005515
Pvu11g1694 458 Gene3D - 6 247 IPR036770 -
Pvu11g1694 458 ProSiteProfiles Ankyrin repeat region circular profile. 112 134 - -
Pvu11g1694 458 Pfam Ankyrin repeats (3 copies) 109 167 IPR002110 GO:0005515
Pvu11g1694 458 PANTHER ANKYRIN REPEAT FAMILY PROTEIN 16 435 - -
Pvu11g1694 458 ProSiteProfiles Ankyrin repeat profile. 112 134 IPR002110 GO:0005515
Pvu11g1694 458 PANTHER HOMEOBOX PROTEIN WARIAI 16 435 - -
Pvu11g1694 458 SUPERFAMILY Ankyrin repeat 15 246 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1694 Pvu-Chr11 42943276 42946852 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1694 9 318 Miscellaneous Gene Families AT4G10720 43.082 2.13e-87 271