Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1669 ATGGTGTTGCAAAGATATTGCCCTATGGCTTTTGTGCAATGGAGTTTCTTCGCTTGGTTTATTTGCTTTTATGTGGGACTTGAGACCCTAGCCAGTTCCTGTGACAAGCATGATTTGTTGGCCCTGAAGGAATTTGCAGGCAACCTTACCGAAGGGTCTATCATCACAGCATGGTCAGATGATGTTGTCTGCTGCAAATGGGTTGGAGTTGTTTGTGACGATGTGGTTGATGGAGCAGCTGGTAGTAGAGTGTCCAAGTTGATTCTACCAGGAATGGGTCTTAACGGCACGATTTCAAGTTCTTTAGCTTATCTTGATGAACTGAAAGTGCTTGATATTTCGTTCAATCGTCTCCAAGGTGGATTGCCTTCTGAGTTATCTAACTTGAAGCAGTTAGAAGTTCTTAACTTGAGCAATAATATTCTTTCTGGACCACTTGTTGGGGCACTCTCTGGTTTGCAATCCATTCAGACACTTAATATTTCTAGCAATTTATTTGTTGGAGAGCTCTTTCAATTTGGAGGATTACAACATCTCGTTGCTCTTAGCATAAGCAACAATTCATTCACTGGTCAGTTCAATTCTGAAATTTGCAGCTTCTCCAAGGGTATTCATGTTCTTGATATATCAAAAAATAAATTTTCTGATGGTCTTGAATGGTTGGGAAACTGCAGCACATCTCTCCAAGAGTTACATTTGGATTCCAATTTTTTTACTGGCTATCTTCCTGATTCCTTGTATTCAATGTCAGCCTTGGAGCAGCTCTCAGTCTCCATGAACAACCTCTCCGGTCAGTTAAGCATGAAGCTAAGTAATCTCTCAAACCTAAAATCTCTAATAATTTCTGGAAATCGGTTTTCAGGGGAACTCCCAAATGTTTTTGGGAATCTTTCGGACTTTGAACAACTAATAGGACACTCCAATTCATTTTCTGGATCATTGCCTTCCACCTTGGCCTTGTGCTCAAAACTTCGAGTGCTTGATCTTCGAAATAATTCTTTGACAGGTTCTGTTAGCCTTGATTTCACTGGGTTGTCTAATCTTTCCACGTTGGATCTTGGTAGCAATCATTTTAATGGACCCCTTCCAAATTCTGTGTCCAATTGCCATGAATTGACAATGTTAAGTCTTGCAAAAAATGAATTAACTGGCCAAATCCCTGGGAGTTATGCAAACCTCACTTCACTTTTGACTCTCTCTCTGTCAAACAATAGCTTTGAGAACCTATCTGGGGCGCTTAATGTACTGCAGCAGTGCAAAAATCTCACCACTCTTATCCTCACAAAGAATTTCCGTGGTGAGGAAATTTCAGAAAATTTAAGAGTAAGCTTCAAGAGCCTTGTGGTTTTAGCACTTGGAGATTGTAGTCTCAAAGGCCGTATTCCTGCCTGGCTATTGAATTGCTCGAAATTGGAAGTTCTTGATTTGTCATGGAACCATTTGGAAGGCAGTGTCCCTTCTTGGATTGGTTGGATGGATCATCTGTTCTACTTGGATTTGTCAAATAATTCTCTTACAGGAGAAATACCAAAAGGTTTGACAGAGCTGAAGGGCCTCATATCCCTAAATTATCATATATCAAGTCTCATTGCATCTGCTGCTATTCCTCTCTATGTCAAGAGAAACAAGAGTGCTAATGGGTTGCAATATAACCATGCTTCGAGTTTCCCTCCATCAATATACTTGAGCAATAACGGATTAAGTGGAACTATATGGCCTGAAATCGGTCGTTTGAGAGAACTTCACATCTTAGATTTAAGCAGGAACAACATCACCGGCACCATTCCCAGCTCTATTTCTCAGATGAAGAATTTGGAAACATTAGAGTTATCTAATAATAATCTATATGGAACTATTCCTCCATCATTTAACAACCTCACATTCTTGTCTAAGTTCAGTGTGGCATATAATCACTTATGGGGAACAATTCCAGCTGGGGGGCAATTTTCAAGTTTCCCAAATTCAAGTTTTGAGGGCAACCTGGGGCTTTGTGGGGAAACATATCGTCATTGTAACAATGAAAAAAATGACAACATTTATACTCATTCCGAGGGAAAATTTGGTAAAAGCAGTGTCCTTGGCATCACAATTGGTTCAGGAGTGGGTCTTGCACTACTTATTGCAGCTATTCTGCTAAGAATGTCAAAGAGGGATGAGGATAAACCGGTGGATAACTTTGATGAGGAGCTTAGCTGGCCAAACAGAATACCTGAAGCACTTGTCACTTCAAAATTGGTGCTTTTTCAGAATTCGGATTGCAAGGATCTCACTGTTGAAGATTTGATAAACTCTACTAACAATTTTAACCAGAAAAATATAATTGGTTGTGGTGGGTTTGGTCTTGTCTACAAGGCGAATCTTCCAAATGGCACAAAGGTAGCTGTGAAGAAACTTTCAGGATACTGTGGTCAGGTGGAACGAGAATTCCAAGCAGAAGTGGAGGCACTCTCTAGAGCTCAACATAAGAACCTTGTTTCACTCAAAGGTTATTGTCAGCATGTCAGTGACAGATTGTTAATTTACTCCTACTTGGAGAATGGAAGCCTTGACTATTGGTTGCATGAGAGTGAGGATGGAAATTCATCTCTAAAATGGAATGTAAGACTCAAGATTGCTCAAGGTGCAGCTCATGGACTAGCTTATTTGCACAAGGAGTGTGAACTACATATTGTGCACAGAGATATCAAATCTAGCAACATACTTTTGGATGATAAATTTGAAGCTTATTTGGCTGACTTTGGTCTTTCAAGGCTTCTTCAACCCTATGATACCCATGTTTCAACAGATTTAGTGGGAACTTTAGGATATATTCCTCCAGAATATAGTCAAGCACTGAAAGCAACATTCAAAGGTGATATTTATAGCTTTGGTGTTGTTCTTGTTGAGCTTCTTACTGGTCGAAGGCCTGTAGAAGTCTTTGTCGGGCAATGCAACAGGAATCTATTGTCTTGGGTGTTTCAGATGAAATCCGAAAATAGGGATCAAGAAATTTTTGATTCAGTGATTTGGCACAAGGATATTGAGAAACAGCTCTTAGAGGTACTTGCTATTGCTTGTAAATGTATAGATGAAGATCCAAGGCAGAGGCCCCATATCGAATTAGTTGTTTCATGGCTTGATGGTGTAGGATTTGATGGCTCTGAACAATCATCATCTTAA 3159 0.3989 MVLQRYCPMAFVQWSFFAWFICFYVGLETLASSCDKHDLLALKEFAGNLTEGSIITAWSDDVVCCKWVGVVCDDVVDGAAGSRVSKLILPGMGLNGTISSSLAYLDELKVLDISFNRLQGGLPSELSNLKQLEVLNLSNNILSGPLVGALSGLQSIQTLNISSNLFVGELFQFGGLQHLVALSISNNSFTGQFNSEICSFSKGIHVLDISKNKFSDGLEWLGNCSTSLQELHLDSNFFTGYLPDSLYSMSALEQLSVSMNNLSGQLSMKLSNLSNLKSLIISGNRFSGELPNVFGNLSDFEQLIGHSNSFSGSLPSTLALCSKLRVLDLRNNSLTGSVSLDFTGLSNLSTLDLGSNHFNGPLPNSVSNCHELTMLSLAKNELTGQIPGSYANLTSLLTLSLSNNSFENLSGALNVLQQCKNLTTLILTKNFRGEEISENLRVSFKSLVVLALGDCSLKGRIPAWLLNCSKLEVLDLSWNHLEGSVPSWIGWMDHLFYLDLSNNSLTGEIPKGLTELKGLISLNYHISSLIASAAIPLYVKRNKSANGLQYNHASSFPPSIYLSNNGLSGTIWPEIGRLRELHILDLSRNNITGTIPSSISQMKNLETLELSNNNLYGTIPPSFNNLTFLSKFSVAYNHLWGTIPAGGQFSSFPNSSFEGNLGLCGETYRHCNNEKNDNIYTHSEGKFGKSSVLGITIGSGVGLALLIAAILLRMSKRDEDKPVDNFDEELSWPNRIPEALVTSKLVLFQNSDCKDLTVEDLINSTNNFNQKNIIGCGGFGLVYKANLPNGTKVAVKKLSGYCGQVEREFQAEVEALSRAQHKNLVSLKGYCQHVSDRLLIYSYLENGSLDYWLHESEDGNSSLKWNVRLKIAQGAAHGLAYLHKECELHIVHRDIKSSNILLDDKFEAYLADFGLSRLLQPYDTHVSTDLVGTLGYIPPEYSQALKATFKGDIYSFGVVLVELLTGRRPVEVFVGQCNRNLLSWVFQMKSENRDQEIFDSVIWHKDIEKQLLEVLAIACKCIDEDPRQRPHIELVVSWLDGVGFDGSEQSSS* 1053
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1669 1052 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 448 534 - -
Pvu11g1669 1052 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 173 282 - -
Pvu11g1669 1052 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 282 439 - -
Pvu11g1669 1052 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 615 1043 - -
Pvu11g1669 1052 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 32 164 - -
Pvu11g1669 1052 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 561 614 - -
Pvu11g1669 1052 ProSitePatterns Serine/Threonine protein kinases active-site signature. 890 902 IPR008271 GO:0004672|GO:0006468
Pvu11g1669 1052 Pfam Leucine Rich Repeat 323 344 IPR001611 GO:0005515
Pvu11g1669 1052 Pfam Leucine Rich Repeat 275 297 IPR001611 GO:0005515
Pvu11g1669 1052 SMART LRR_typ_2 105 128 IPR003591 -
Pvu11g1669 1052 SMART LRR_typ_2 393 415 IPR003591 -
Pvu11g1669 1052 SMART LRR_typ_2 129 152 IPR003591 -
Pvu11g1669 1052 SMART LRR_typ_2 578 601 IPR003591 -
Pvu11g1669 1052 SMART LRR_typ_2 273 296 IPR003591 -
Pvu11g1669 1052 SMART LRR_typ_2 492 516 IPR003591 -
Pvu11g1669 1052 SMART LRR_typ_2 321 344 IPR003591 -
Pvu11g1669 1052 SMART LRR_typ_2 345 369 IPR003591 -
Pvu11g1669 1052 SMART LRR_typ_2 602 625 IPR003591 -
Pvu11g1669 1052 Gene3D Ribonuclease Inhibitor 375 680 IPR032675 -
Pvu11g1669 1052 Gene3D Ribonuclease Inhibitor 265 366 IPR032675 -
Pvu11g1669 1052 Gene3D Ribonuclease Inhibitor 173 264 IPR032675 -
Pvu11g1669 1052 Gene3D Ribonuclease Inhibitor 33 172 IPR032675 -
Pvu11g1669 1052 Gene3D Phosphorylase Kinase; domain 1 734 843 - -
Pvu11g1669 1052 SMART serkin_6 768 1039 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu11g1669 1052 ProSiteProfiles Protein kinase domain profile. 768 1039 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu11g1669 1052 SUPERFAMILY L domain-like 238 651 - -
Pvu11g1669 1052 PRINTS Leucine-rich repeat signature 495 508 - -
Pvu11g1669 1052 PRINTS Leucine-rich repeat signature 602 615 - -
Pvu11g1669 1052 Pfam Protein kinase domain 768 1035 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu11g1669 1052 SMART LRR_sd22_2 105 131 - -
Pvu11g1669 1052 SMART LRR_sd22_2 321 350 - -
Pvu11g1669 1052 SMART LRR_sd22_2 249 275 - -
Pvu11g1669 1052 SMART LRR_sd22_2 492 515 - -
Pvu11g1669 1052 SMART LRR_sd22_2 393 411 - -
Pvu11g1669 1052 SMART LRR_sd22_2 602 628 - -
Pvu11g1669 1052 SMART LRR_sd22_2 578 601 - -
Pvu11g1669 1052 Gene3D Transferase(Phosphotransferase) domain 1 844 1044 - -
Pvu11g1669 1052 SUPERFAMILY Protein kinase-like (PK-like) 751 1039 IPR011009 -
Pvu11g1669 1052 SUPERFAMILY L domain-like 53 303 - -
Pvu11g1669 1052 Pfam Leucine rich repeat N-terminal domain 36 73 IPR013210 -
Pvu11g1669 1052 ProSitePatterns Protein kinases ATP-binding region signature. 774 797 IPR017441 GO:0005524
Pvu11g1669 1052 Pfam Leucine rich repeat 446 505 IPR001611 GO:0005515
Pvu11g1669 1052 Pfam Leucine rich repeat 579 639 IPR001611 GO:0005515
Pvu11g1669 1052 Pfam Leucine rich repeat 107 165 IPR001611 GO:0005515
Pvu11g1669 1052 PANTHER PHYTOSULFOKINE RECEPTOR 2 32 164 - -
Pvu11g1669 1052 PANTHER PHYTOSULFOKINE RECEPTOR 2 561 614 - -
Pvu11g1669 1052 PANTHER PHYTOSULFOKINE RECEPTOR 2 282 439 - -
Pvu11g1669 1052 PANTHER PHYTOSULFOKINE RECEPTOR 2 448 534 - -
Pvu11g1669 1052 PANTHER PHYTOSULFOKINE RECEPTOR 2 173 282 - -
Pvu11g1669 1052 PANTHER PHYTOSULFOKINE RECEPTOR 2 615 1043 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1669 Pvu-Chr11 42356831 42360895 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1669 65 1051 Receptor kinase-like Gene Family AT1G55610 34.458 3.27e-160 503
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Pvu11g1669 Pkinase 6.4e-43 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g0763 5 12864117 12867889 Pvu11g1669 11 42356831 42360895 PCT