Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1668 ATGGCAGAGGTGAAGATGATCGCGGTGGTGGGCGGTGGCCAAATGGGATCGGGAATAGCGCAAGTTGCTGCCATGAACGGCATCGACGTTTTCCTTCACGACCGCGATCCCCAAGTCCTTTCCAAAGCCTCCTCTTCCATCTCCTCCTCCATCCACCGTATGGTCTCCAAAGGCACCATTTCTCAGACGGTGGGAGTTGATGCATTGAAACGACTGCGTTTGACCACGAATCTAGAGGACTTTCACACGGCGGATTTCATCATCGAAGCGATTGTGGAATCCGAAGACGTGAAGAAGAGTTTATTCGTTAGATTGGACAAGATTGCGAAGAGTTCTGCGATTTTGGCTTCAAACACGAGCTCCATTTCCATCACGCGTATAGCTTCTTCTACAACTAGGCCTCGTCAGGTGATCGGAATGCATTTTATGAACCCTCCGCCTCTGATGAAATTGATTGAGATTGTACGAGGAGCAGACACTTCTGACGACACATTTGCTGCTACGAAAGCATTGTCAGAGAGGTTTGGCAAGGTAGTAATTACCTCCCAGGATTATCCAGCTTTCATAGTGAATCGAATCCTTATGCCTATGATAAATGAAGCATTTTATACTCTGTACACTGGGGTTGCAACCAAAGAGGATATTGACACAGGAATGAAGCTAGGTACTAACCATCCAATGGGTCCTTTACAGCTTGCAGACTTTATTGGGTTGGATGTGTGCTTGTCAGTAATGAGAGTTCTTCATACTGGTCTTGGAGACAACAAATATGCACCATGCCCTCTCCTTGTGCAATACGTTGATGCTGGAAGACTTGGAAGAAAGCGAGGTATTGGCGTCTATGAATATAGTGAAGAGCCAAGGTCTACAAACTCATCTTCTCGTCTCTAA 891 0.4646 MAEVKMIAVVGGGQMGSGIAQVAAMNGIDVFLHDRDPQVLSKASSSISSSIHRMVSKGTISQTVGVDALKRLRLTTNLEDFHTADFIIEAIVESEDVKKSLFVRLDKIAKSSAILASNTSSISITRIASSTTRPRQVIGMHFMNPPPLMKLIEIVRGADTSDDTFAATKALSERFGKVVITSQDYPAFIVNRILMPMINEAFYTLYTGVATKEDIDTGMKLGTNHPMGPLQLADFIGLDVCLSVMRVLHTGLGDNKYAPCPLLVQYVDAGRLGRKRGIGVYEYSEEPRSTNSSSRL* 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1668 296 PANTHER 3-HYDROXYACYL-COA DEHYDROGENASE FAMILY PROTEIN 1 287 - -
Pvu11g1668 296 PIRSF HCDH 1 296 IPR022694 GO:0006631|GO:0016616|GO:0070403
Pvu11g1668 296 Gene3D - 190 295 IPR013328 GO:0016491
Pvu11g1668 296 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 2 186 IPR036291 -
Pvu11g1668 296 Pfam 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 7 184 IPR006176 GO:0006631|GO:0070403
Pvu11g1668 296 SUPERFAMILY 6-phosphogluconate dehydrogenase C-terminal domain-like 186 288 IPR008927 -
Pvu11g1668 296 Pfam 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 188 283 IPR006108 GO:0006631|GO:0016491|GO:0016616
Pvu11g1668 296 ProSitePatterns 3-hydroxyacyl-CoA dehydrogenase signature. 184 209 IPR006180 GO:0006631|GO:0016491|GO:0016616
Pvu11g1668 296 Gene3D - 2 189 - -
Pvu11g1668 296 PANTHER 3-HYDROXYACYL-COA DEHYDROGENASE FAMILY PROTEIN 1 287 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1668 Pvu-Chr11 42350632 42354197 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1668 62 285 Acyl Lipid Metabolism Gene Families AT3G15290 79.911 7.54e-137 384
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g1668 11 42350632 42354197 Pvu11g1668 11 42350632 42354197 ECH