Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1592 ATGAACATTCTTACTTACGTGATTTTATTTGCATGCATACTTGTTCCCTCTATCAAGATTTCCGTAGCAGATGATTCTATCAATGTGCCCCAATCGATGAGTGATGGAGAAACCTTGGTGTCAAAAGGTGGAAACTTCGAACTAGGGTTTTTCAGCACAAGTGATTCCCAGAAACGTTACGTGGGGATTTGGTTCAAAAAGGTCCCAGTTCAGACAATTGTTTGGGTTGCTAATGGGGTCAACCCCATCAATGGTTCCTCAGGAATCTTAACACTGAACACCACAGGCAATCTTGTTCTCACCCAAAATGGGTCTCTTGTTTGGCGCACCATCTCTCGCAAACTAGCACAGAATCCAGTGGCAGTGCTCTTGGACAGTGGCAATCTTGTGATAAGAAATGAAGGAGAAACAAACCCAGAGGAGTATTTGTGGCAAAGCTTTGATCATCCATCAAATACACTCTTGCCAGGGATGAAGGTGGGGTGGAACCTCCGAACAGGTCTGGAACGGAAAATAACATCTTGGAAAAGCCCAGATGATCCATCCCCAGGTGACATTTCATGGAGTTTAAAACCCTATAATTATCCTGAGTTTTATCTAATGCAGGGAACAAAAAAGTTATATCGACAGGGACCTTGGAATGGACTCTTTTATAGTGGAATACCAGATCTACAGAATAACACTATCTTCGGAATCACTTTTGTGCATGATAACGATGAGATTTTCGGTAGGTTTACCCTTGCAAATACTTCTGTACTCTGCATAAATGTAATAAACCAAACAGGTAGAGCTACTAACCTTGTATGGGTCGAGGGTGATCGAAATTGGAGGATATACATGTCACTGCCGAAAGACTTTTGTGATTCTTATGGCATCTTTGGAGCCTATGGGAAATGCATGAGTACGCTGACGCAAGTGTGCCAATGTTTGAAAGGGTTTAGTCCAAAGTCAGCACTAGCGTGGAGTTCATCTGACTGGAGTCAAGGATGTGTCCGCAATAAACCTTTGAGTTGCAAGGGTGAAGAGAAAGATGGGTTTTTCAAAGTTCCTGATACTGCACATACTTGGTTGGATGCAAGTATTGGTTTAGAGGAGTGCAGAGAGAAGTGCTTGAACAATTGTTCTTGTATGGCCTATGCTAATTCAGACATAAGAGGTGCAGGTAGCGGTTGTGTCTTGTGGTTTGAGGATCTCATTGACTTGAAGCAGATTCAAACTGGTGGGCAAGATCTATACATCAGAATGTCTGCTTCAGAGTTAGAGAAAGACAAGATCAAGAATGATGAAATTAGTGTACCAACATTTAATTTTTCATATATATCCAATGCCACAAATCACTTTTCACAAAACAACAAATTGGGACAAGGTGGCTTTGGAGCAATTGCAGTTAAGAGACATTCTCAAACTTCTACACAAGGTCTAGACGAATTAAAAAATGAAGTTATGTTGATAGCAAAACTTCAACATCGTAATCTTAAATTGTTGATTTATGAATTCATGACTAATGGAAGTTTAGACTTCTTTATTTTCGATTCATCAAGACGTGCACTATTAGGTTGGACTAAGCTACTTGAAATTATTGGTGGAATTGCACGAGGACTTCTCTATCTTCATCATGATTCTAGACTAAAAATTATTCAGAGAGATCTCAAAGCTAGTAATATTCTTCTTGATAGTAATATGATTCCAAAAATATCAGACTTTGGTATTGCTAGAACATTTGGACTTGATCAGGATGAAGCAAATACAAATAGATTAATGGGAACATATGGTTATATGGCTCTTGAATATGTTGTGCATGGATATTTCTCAGTCAAATCTGATGTCTTTGCCTTCGGTGTTATTGTGTTAGAGATAATTAGTGGAAGAAAGAATAGAGGATTTTGTGATCCATATCATCATCTAAATCTTCTTGGACATACTTGGATTGAAAAAAATCCAACAGAACTTATGGATGACTTGGTAGATGGATTCGTGGATCCTTCAAACATATTAAGGTATATTCATATTGCTTTATTATGTGTACAAGAAAGACCAGAAGATAAGCCAAATATGTCATCAGTGGTTTTAATGTTGAATGGTGAGAAGATATTGTCTGAGCCAAGTCAACCTGGATTCTACACAGGAAAAGATCATTCAACAATTACAAATTATTTTCCTATAAACTTTTATGTGAATTCTCCCAATGAAATGTCTAACTCAATGTTGGAGGCAAGATGA 2220 0.3833 MNILTYVILFACILVPSIKISVADDSINVPQSMSDGETLVSKGGNFELGFFSTSDSQKRYVGIWFKKVPVQTIVWVANGVNPINGSSGILTLNTTGNLVLTQNGSLVWRTISRKLAQNPVAVLLDSGNLVIRNEGETNPEEYLWQSFDHPSNTLLPGMKVGWNLRTGLERKITSWKSPDDPSPGDISWSLKPYNYPEFYLMQGTKKLYRQGPWNGLFYSGIPDLQNNTIFGITFVHDNDEIFGRFTLANTSVLCINVINQTGRATNLVWVEGDRNWRIYMSLPKDFCDSYGIFGAYGKCMSTLTQVCQCLKGFSPKSALAWSSSDWSQGCVRNKPLSCKGEEKDGFFKVPDTAHTWLDASIGLEECREKCLNNCSCMAYANSDIRGAGSGCVLWFEDLIDLKQIQTGGQDLYIRMSASELEKDKIKNDEISVPTFNFSYISNATNHFSQNNKLGQGGFGAIAVKRHSQTSTQGLDELKNEVMLIAKLQHRNLKLLIYEFMTNGSLDFFIFDSSRRALLGWTKLLEIIGGIARGLLYLHHDSRLKIIQRDLKASNILLDSNMIPKISDFGIARTFGLDQDEANTNRLMGTYGYMALEYVVHGYFSVKSDVFAFGVIVLEIISGRKNRGFCDPYHHLNLLGHTWIEKNPTELMDDLVDGFVDPSNILRYIHIALLCVQERPEDKPNMSSVVLMLNGEKILSEPSQPGFYTGKDHSTITNYFPINFYVNSPNEMSNSMLEAR* 740
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1592 739 Gene3D Transferase(Phosphotransferase) domain 1 500 702 - -
Pvu11g1592 739 SUPERFAMILY alpha-D-mannose-specific plant lectins 73 181 IPR036426 -
Pvu11g1592 739 Pfam D-mannose binding lectin 72 176 IPR001480 -
Pvu11g1592 739 SMART serkin_6 447 672 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu11g1592 739 Gene3D Phosphorylase Kinase; domain 1 421 499 - -
Pvu11g1592 739 Pfam S-locus glycoprotein domain 208 317 IPR000858 GO:0048544
Pvu11g1592 739 CDD B_lectin 31 150 IPR001480 -
Pvu11g1592 739 SMART blect_4 30 150 IPR001480 -
Pvu11g1592 739 PANTHER - 13 420 - -
Pvu11g1592 739 PANTHER - 423 717 - -
Pvu11g1592 739 Pfam PAN-like domain 347 401 IPR003609 -
Pvu11g1592 739 Gene3D - 19 148 IPR036426 -
Pvu11g1592 739 ProSiteProfiles Protein kinase domain profile. 379 698 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu11g1592 739 SUPERFAMILY Protein kinase-like (PK-like) 433 708 IPR011009 -
Pvu11g1592 739 CDD PAN_AP_plant 335 414 - -
Pvu11g1592 739 ProSiteProfiles Bulb-type lectin domain profile. 24 144 IPR001480 -
Pvu11g1592 739 PANTHER S-LOCUS GLYCOPROTEIN DOMAIN, PAN/APPLE DOMAIN PROTEIN-RELATED 423 717 - -
Pvu11g1592 739 PANTHER S-LOCUS GLYCOPROTEIN DOMAIN, PAN/APPLE DOMAIN PROTEIN-RELATED 13 420 - -
Pvu11g1592 739 Pfam Protein tyrosine and serine/threonine kinase 477 689 IPR001245 GO:0004672|GO:0006468
Pvu11g1592 739 ProSiteProfiles PAN/Apple domain profile. 338 416 IPR003609 -
Pvu11g1592 739 SMART ntp_6 341 415 IPR003609 -
Pvu11g1592 739 PIRSF SRK 1 432 IPR024171 GO:0004674
Pvu11g1592 739 PIRSF SRK 420 739 IPR024171 GO:0004674
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1592 Pvu-Chr11 40662694 40666838 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1592 419 722 Receptor kinase-like Gene Family AT4G05200 46.957 1.09e-95 310
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pvu11g1592 PK_Tyr_Ser-Thr 8.7e-28 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g1592 11 40662694 40666838 Pvu11g1592 11 40662694 40666838 ECH