Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1584 ATGACCTTGGTTTCCCAAGGTGAAACATTTGAACTCGGTTTCTTCAGTCCTGAGAACTCAAAGAATCGTTATCTTGGAATTTGGTACAAGAATATCACACAGACAGTTGTTTGGGTGGCAAATGGGGCCATCAATGACTCCTCAGGGATCTTAACACTGAACAGCACAGGAAGCCTTGTTCTCAGGCAGCATGACAAGGTTGTGTGGTACACAACAACGTCTGAAAAACAAGCACGGAATCCTGTGGCACAGCTTCTGGATTCAGGGAACCTTGTGGTAAGAGATGAGAGTGAAACAGACTCAGAAGAAGCCTATCTGTGGCAAAGCTTTGACCACCCTTCAGACACAATATTGCCAGGGATGAAGCTGGGACGGAACATCAGAACTGGCATGGAATGGAGAATGACAGCTTGGAAGAGTCCCAATGATCCATCCCCAGGAAACTTTTATTGGGGTCTATTGCCTTATAATTATCCTGAGTTTTATCTGATGAAGGGTACAGAAAAATTTGTGAGAATTGGACCATGGAATGGCCTACATTTCAGTGGTATACCAGATCAAAAGCCTAACTCCATTTATGATTTCAACTACATATCCAACAAGGATGAGATGTACTACACTTTCAGCCTCAAGAATGATGCTGTGATCTCAAGATTGGTAATGAATCAAACCAGTTATATGACTATTCGGTACGTATGGATGGAAGATGGACAATATTGGAAGTTATATAAATCACTGCCAAAAGACAATTGTGACTATTATGGAATATGTGGAGTCTATGGGACATGCACCATCACAGGCCCTCAAATATGTCAATGCTTATCAGGGTTCAGTCCCAAGTCACCACAAGCATGGAACTCATCTGACTGGTCTGATGGGTGTGTACGGAATAAGCCATTAAACTGCACTGAGAAACACAAGGATGGCTTTGTGAAAGTGAAAGGTGTGAAAGTGCCAGATACTACAAATACTTGGGTAGATGAGACAATAAGTCTAGAAGAATGCAGAGAGAAGTGCTCAAATAATTGTTCTTGTATGGCCTATACTAATTCAGACATAAATGGTAAAGGTACTGGTTGTGTCATGTGGTTTGGAGATCTAATTGATATTAGACAGTTTGATAATGATGGGCAGGATCTACATATTCGAATGCATGCTTCAGAAATAGGGAAACAAGAAGGGAACAAGAAAGTGATAATAATAGTTGCTTCCATCATTGTCATCATTTTAGGAGTCATTTTCATTGGTTGCTATCGATTCTACACTGTCCGGCACAGCATAACTGAGTATTCAGACACTGTACATGATGAAAATAGAGAAGGTAGTGAAGATGATCTTGATCTCCCATCACTAGACCTTTCAACAATAGTCACTGCCACCAATAACTTCTCAATAAAAAACAAGATTGGAGAAGGTGGTTTTGGACCAGTATACAAGGGAAAAACAGTAAGTGGACAAGAAATTGCTGTGAAGAGGCTTTCAAGAAGCTCTGGACAAGGAATGACAGAGTTCAAGAATGAAGTAAAACTGATAGCAAAACTTCAGCACCGAAATCTTGTTAAGCTTCTCGGTTGTTGCGTTCAGGAACAGGACAGAATGCTAGTCTATGAATACATGCCTAACCGTAGTTTGGATTGGTTGATATTTGATGATACTAAAAGCAAAATGCTAGATTGGCCTAAGCGCTTCAACATTAGTGGAATTGCCCGAGGTCTCCTTTATCTTCATCATGATTCTAGATTGAGGATAATTCATAGAGATCTCAAAGCAAGTAATGTTTTGCTGGATGACCAGATGAATCCAAAAATATCAGATTTTGGCATTGCTAGAATTTTTGGAGGAGATCAGACAGAAGGAAACACAAAGCGAGTAGCAGGAACATATGGCTACATGTCACCAGAATATGCAGCAGATGGTCTTTTTTCTATGAAATCTGATGTTTTCAGTTTTGGTATTTTGCTGCTGGAGATTATAAGTGGAAAGAGAAATAGAGGCTTCTATCTTGAAAACCAATATCCTAACCTTGTAACTCATGCATGGAGTCTATGGCAAGAGGGTACGGCTATAGAGATGGTTGACTCAAGCATTGAGGACTCATGTGTTTTATCAGAGGTTTTGCGTTGCATCCATGTGAGTCTCTTATGTGTCCAACAATATGCAGAGGATAGACCTGTAATGTCTGCTGTGGTTCTAATGCTGGGGAGTGAGAGTGAATTGGCTGAGCCAAAAGAACCTGGTTTCTATATAAAGAATGATCAAGTTGCAACAACTTCTACCTCAGGTCGAACTACCTCAACCAATGAAATAACTATCACATTGTTAGAAGCTAGATGA 2334 0.4032 MTLVSQGETFELGFFSPENSKNRYLGIWYKNITQTVVWVANGAINDSSGILTLNSTGSLVLRQHDKVVWYTTTSEKQARNPVAQLLDSGNLVVRDESETDSEEAYLWQSFDHPSDTILPGMKLGRNIRTGMEWRMTAWKSPNDPSPGNFYWGLLPYNYPEFYLMKGTEKFVRIGPWNGLHFSGIPDQKPNSIYDFNYISNKDEMYYTFSLKNDAVISRLVMNQTSYMTIRYVWMEDGQYWKLYKSLPKDNCDYYGICGVYGTCTITGPQICQCLSGFSPKSPQAWNSSDWSDGCVRNKPLNCTEKHKDGFVKVKGVKVPDTTNTWVDETISLEECREKCSNNCSCMAYTNSDINGKGTGCVMWFGDLIDIRQFDNDGQDLHIRMHASEIGKQEGNKKVIIIVASIIVIILGVIFIGCYRFYTVRHSITEYSDTVHDENREGSEDDLDLPSLDLSTIVTATNNFSIKNKIGEGGFGPVYKGKTVSGQEIAVKRLSRSSGQGMTEFKNEVKLIAKLQHRNLVKLLGCCVQEQDRMLVYEYMPNRSLDWLIFDDTKSKMLDWPKRFNISGIARGLLYLHHDSRLRIIHRDLKASNVLLDDQMNPKISDFGIARIFGGDQTEGNTKRVAGTYGYMSPEYAADGLFSMKSDVFSFGILLLEIISGKRNRGFYLENQYPNLVTHAWSLWQEGTAIEMVDSSIEDSCVLSEVLRCIHVSLLCVQQYAEDRPVMSAVVLMLGSESELAEPKEPGFYIKNDQVATTSTSGRTTSTNEITITLLEAR* 778
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1584 777 PIRSF SRK 1 777 IPR024171 GO:0004674
Pvu11g1584 777 Pfam Domain of unknown function (DUF3403) 736 777 IPR021820 GO:0004674
Pvu11g1584 777 ProSiteProfiles EGF-like domain profile. 247 283 IPR000742 -
Pvu11g1584 777 Gene3D Hepatocyte Growth Factor 301 386 - -
Pvu11g1584 777 SMART serkin_6 463 726 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu11g1584 777 Pfam D-mannose binding lectin 35 139 IPR001480 -
Pvu11g1584 777 SUPERFAMILY Protein kinase-like (PK-like) 449 733 IPR011009 -
Pvu11g1584 777 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 8 776 - -
Pvu11g1584 777 ProSiteProfiles Bulb-type lectin domain profile. 1 106 IPR001480 -
Pvu11g1584 777 Gene3D - 1 110 IPR036426 -
Pvu11g1584 777 ProSiteProfiles PAN/Apple domain profile. 302 385 IPR003609 -
Pvu11g1584 777 SMART ntp_6 305 384 IPR003609 -
Pvu11g1584 777 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 8 776 - -
Pvu11g1584 777 SMART blect_4 2 113 IPR001480 -
Pvu11g1584 777 CDD STKc_IRAK 469 733 - -
Pvu11g1584 777 Pfam S-locus glycoprotein domain 172 281 IPR000858 GO:0048544
Pvu11g1584 777 SUPERFAMILY alpha-D-mannose-specific plant lectins 36 144 IPR036426 -
Pvu11g1584 777 Pfam PAN-like domain 302 370 IPR003609 -
Pvu11g1584 777 Gene3D Transferase(Phosphotransferase) domain 1 539 748 - -
Pvu11g1584 777 ProSitePatterns Serine/Threonine protein kinases active-site signature. 583 595 IPR008271 GO:0004672|GO:0006468
Pvu11g1584 777 CDD PAN_AP_plant 299 383 - -
Pvu11g1584 777 Gene3D Phosphorylase Kinase; domain 1 426 538 - -
Pvu11g1584 777 Pfam Protein tyrosine and serine/threonine kinase 464 730 IPR001245 GO:0004672|GO:0006468
Pvu11g1584 777 CDD B_lectin 2 113 IPR001480 -
Pvu11g1584 777 ProSiteProfiles Protein kinase domain profile. 463 739 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1584 Pvu-Chr11 39998050 40001560 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1584 395 751 Receptor kinase-like Gene Family AT4G23230 54.144 1.12e-127 393
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pvu11g1584 PK_Tyr_Ser-Thr 7.4e-45 CL0016