Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1581 ATGTGTAACAAAGCAATGACCTCTTTCACTTTTCTCTTTCTTTTCTCTTATCTACTCAATTTGTTGCCTATAATTTCCTCTGCAACTGACACCATTAATGTGTCACAGCCCCTTCTTGATGGCAGCACCTTGGTGTCTAAAGATGGAACTTTTGAAATGGGTTTCTTTAGTCCAAAAAATAGTACTCAGACTACCACAAATCGGTACCTTGGAATATGGTACAGAAGTATCCCAGTTAGAACCGTCGTTTGGGTTGCCAACCGTGAAAACCCAGTTAAGGATAGTTCCAGCAAGTTCAGCATAAACACAGATGGAAAATTGGTTATCCTCAGCAGTAACAATACTCTTGTTTGGTCAGCAAACTCAACTGAAGAAACGAAAGCACAGAGTCCAATTGTTCAGCTGTTAGACTCAGGGAACTTGGTACTAAGAGATGAGAAGGATTCGAACCCACAGATATACTTGTGGCAAAGCTTTGACTACCCTTGTGATACTTTTCTGCCAGGAATGAAGATCGGATGGAACCTCAAGACGGGTCTTAACCGGCGTTTAACAGCATGGAAGAACTGGGATGACCCTTCTCCAGGCGACTTCATTTGGGGTATGGTGCTAGGTAACACTACTGAATTGGTTATGTGGAAAGGTACTAGTGAGTATTATAGGAGTGGCCCTTGGAATGGTGTTAGATTCAATGGCAAAACCACACCCCTTTTTAACTTAGAGTTATATTCCTCTGTTGATGAAGTGTATTACACATACAACATCGGGAATAAGTCCTTGATTACAAGAGTTGTTTTGAACCAATCTGTTTATTCTCGCCAACGCTATAATTTGAATGTAGAGAACCAAACCTGGAAGCTCTATTCATCAGTTCCAAGAGACATTTGTGACACCTACAATCTTTGTGGTCCCTATGGGAACTGTCTTGCGAATGAATCACCACCGTGCCAGTGTTTAACCGGGTTCAAGCCAAAATCAGTTCAAAATTATGAGGCATTGGATTGGATCCAAGGATGTGTTCTTAGTGAAGCGTGGAGTTGTGGAGTAAAAAGTAAAGATGGCTTTAAAAAATTCAGTGGGTTGAAAATGCCAGATACTACAAGTTCTTGGGTTGATCAAAATTTGACACTTGAGGATTGCAAGGAAAAATGCTTGCTAAATTGTTCTTGCACTGCATATGCAAATTTAGACGTCAGGGGAGATGGTAAAGGCTGTATCATTTGGCATGGAGCTTTGCTTGATTTAAGGGTGGCTTCAGTTCCCGGGCAAGACCTATTTATTCGAATGGTTGCTTCAGAAAATGGATGGGATAAGAAAATTGTAGCAGTGGTGATTCCTGTGACTCTCCTTGCTTTTGTTATTGTTTTCATTTTCTCCTATGTTTACTGGCGGAAAAGAAAGCTTAGAGAGAAAACCTCAGAAGAAAACAAAGATGAAGGATGTGAAGAAGACTTTGAGCTTTCTTCCTTTGATTTTTCTACTATAGTTCGTGCAACAAATAACTTCTCAAGTGACAAGAGGCTTGGCCAAGGTGGTTTTGGACCTGTGTATTGGGGTACACTAGAAGATGGACAAGAGATTGCTGCCAAGAAGCTCTGTAATAGTACTGGACAAGGAGTGAAAGAATTCAAGAACGAAGTTATACTGTGTGCCAAACTTCAGCACCGAAATCTTGTTAAGGTTCTCGGTTGCTCCACTCAAGGAGGGGAAAAAGTGCTGGTCTATGAATACATGCCTAATAAAAGCCTGGATTCCTTTCTTTTTGATTCTTCCAAAAGTGGACTCTTAGACTGGTCTAAGCGATTTAACATAATATTTGGAATTGCCCGAGGACTTCTTTATCTTCATCAAGATTCTAGGTTGAGAATAATTCATAGAGACATGAAAGCAAGCAATATTCTACTAGATAGCGAGTTAAATCCAAAAATTTCAGATTTTGGTGTCGCCCGAATGTTTAGTGCAGATCAAACAGAAGAGAATACGAAAATGGTGGTTGGAACTTATGGATACATGGCACCAGAATACGCAATTGATGGGTTGTTCTCTGTCAAATCTGATGTATACAGCTTTGGGGTACTATTACTTGAGATAATAAGTGGGAAGAAAAACAGAGGAATTTTCTTTCCAGATCACGGGCTTAATCTATTAGGACATGCTTGGAGATTGTGGAAAGAAAGCTCTCCAATGAAATTAGTTGATGCTGCTTTGGGAGACACCTTTACTGTCTCTGAAGTACTACGTTGCATACATGTTGGTCTTTTATGTGTGCAACTATATCCAGAGGATAGGCCAAACATGGCATCAGTGATTTTTATGTTGAGCAGTGAAAATACTTTGCCAACACCTAAGGAACCTGGTTTCCTTATTGATAGGACGAAGATTGCTGGCGAATGTTCAACTAGCAATGAGATGAAGACTTCCACTAATGAATTAACTGTAACCCTACTAGAGGCTAGGTAG 2460 0.4024 MCNKAMTSFTFLFLFSYLLNLLPIISSATDTINVSQPLLDGSTLVSKDGTFEMGFFSPKNSTQTTTNRYLGIWYRSIPVRTVVWVANRENPVKDSSSKFSINTDGKLVILSSNNTLVWSANSTEETKAQSPIVQLLDSGNLVLRDEKDSNPQIYLWQSFDYPCDTFLPGMKIGWNLKTGLNRRLTAWKNWDDPSPGDFIWGMVLGNTTELVMWKGTSEYYRSGPWNGVRFNGKTTPLFNLELYSSVDEVYYTYNIGNKSLITRVVLNQSVYSRQRYNLNVENQTWKLYSSVPRDICDTYNLCGPYGNCLANESPPCQCLTGFKPKSVQNYEALDWIQGCVLSEAWSCGVKSKDGFKKFSGLKMPDTTSSWVDQNLTLEDCKEKCLLNCSCTAYANLDVRGDGKGCIIWHGALLDLRVASVPGQDLFIRMVASENGWDKKIVAVVIPVTLLAFVIVFIFSYVYWRKRKLREKTSEENKDEGCEEDFELSSFDFSTIVRATNNFSSDKRLGQGGFGPVYWGTLEDGQEIAAKKLCNSTGQGVKEFKNEVILCAKLQHRNLVKVLGCSTQGGEKVLVYEYMPNKSLDSFLFDSSKSGLLDWSKRFNIIFGIARGLLYLHQDSRLRIIHRDMKASNILLDSELNPKISDFGVARMFSADQTEENTKMVVGTYGYMAPEYAIDGLFSVKSDVYSFGVLLLEIISGKKNRGIFFPDHGLNLLGHAWRLWKESSPMKLVDAALGDTFTVSEVLRCIHVGLLCVQLYPEDRPNMASVIFMLSSENTLPTPKEPGFLIDRTKIAGECSTSNEMKTSTNELTVTLLEAR* 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1581 819 SMART blect_4 35 162 IPR001480 -
Pvu11g1581 819 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 28 816 - -
Pvu11g1581 819 ProSiteProfiles PAN/Apple domain profile. 347 430 IPR003609 -
Pvu11g1581 819 CDD STKc_IRAK 508 773 - -
Pvu11g1581 819 Gene3D Hepatocyte Growth Factor 346 422 - -
Pvu11g1581 819 PIRSF SRK 2 819 IPR024171 GO:0004674
Pvu11g1581 819 Pfam Domain of unknown function (DUF3403) 774 819 IPR021820 GO:0004674
Pvu11g1581 819 SUPERFAMILY Protein kinase-like (PK-like) 486 781 IPR011009 -
Pvu11g1581 819 ProSiteProfiles Bulb-type lectin domain profile. 29 156 IPR001480 -
Pvu11g1581 819 Gene3D Transferase(Phosphotransferase) domain 1 578 782 - -
Pvu11g1581 819 SMART ntp_6 350 429 IPR003609 -
Pvu11g1581 819 Pfam D-mannose binding lectin 81 188 IPR001480 -
Pvu11g1581 819 PANTHER - 28 816 - -
Pvu11g1581 819 ProSiteProfiles Protein kinase domain profile. 502 779 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu11g1581 819 CDD B_lectin 35 162 IPR001480 -
Pvu11g1581 819 SMART serkin_6 502 749 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu11g1581 819 Pfam S-locus glycoprotein domain 220 326 IPR000858 GO:0048544
Pvu11g1581 819 Pfam Protein tyrosine and serine/threonine kinase 505 703 IPR001245 GO:0004672|GO:0006468
Pvu11g1581 819 SUPERFAMILY alpha-D-mannose-specific plant lectins 82 193 IPR036426 -
Pvu11g1581 819 Gene3D - 23 159 IPR036426 -
Pvu11g1581 819 Pfam PAN-like domain 347 415 IPR003609 -
Pvu11g1581 819 Gene3D Phosphorylase Kinase; domain 1 463 577 - -
Pvu11g1581 819 ProSitePatterns Serine/Threonine protein kinases active-site signature. 623 635 IPR008271 GO:0004672|GO:0006468
Pvu11g1581 819 CDD PAN_AP_plant 346 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1581 Pvu-Chr11 39932310 39935581 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1581 436 787 Receptor kinase-like Gene Family AT4G23230 55.211 1.45e-132 407
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pvu11g1581 PK_Tyr_Ser-Thr 5.4e-44 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g0910 5 24200166 24203696 Pvu11g1581 11 39932310 39935581 PCT