Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1580 ATGGTCTGTTACACTTTTCTGTTTCTTTTTGCCGAGCTAATCATGCAGTTCCCTTCAATTTCGTCTGCAACTGATACCTTTAACGGGTCGCAGTCCCTTCCTGATGGCACAACCTTGGTGTCTAAAGATGGAACTTTTGAAATGGGTTTCTTCAGTCCAAGCAACAATAACACAACTACAAATCGCTACCTTGGAATATGGTACAAAAGTATCCCAGTTAGAACCGTTGTTTGGGTTGCCAACCGTGAAAACCCAGTTAAGGATAACTCCAGCAAGTTGAGTATAAGCACACAAGGAAAACTTGTGATCCTCAGCAAGAACAACACTCTTGTTTGGTCAGCAGACACGACAGAAGAAACAAAAGCACAGAGTCTATTTGTTCAGCTTTTGGACTCGGGGAACTTGGTACTAAGAGATGAGAAAGATTCAAATCCACTAAACTTCTTGTGGGAAAGCTTTGACTATCCTTGTGATACTTTTCTTCCAGGTATGAAGATTGGATGGAACCTTAAGAAGGGTCTTAGCTGGAGATTAACCGCGTGGAAGAACTGGGATGACCCTTCTCCAGGGAACTTCAGTTGGGGTATGGAGCCTGGTAACACTCGTGAACTGGTCATGTGGAAAGGTTCTAGTGAGTATTATAGAAGTGGCCCTTGGAATGGTGTTAGATTCAGTGGCAAATACACTCCCCGTTACAACTTAGAATTTAACTCCAGTCAAGATGAAGTGTATTATACATACAAGTTTGTCAGCAATTCATTTATTACAAGGGTTGTTTTGAACCAATCCCTTTATTCTCGACAACGCTATAATTGGATTAATGAGAACCAAACTTGGAGTCCTTATTCAGTGGTTCCTAGAGACAAATGTGACAACTACAATGTTTGTGGTCCCTATGGCAATTGTGTTGGGGATGAACCATTGCAATGCGAGTGTTTAATGGGATTCAAACCAAAATCAGTTCAAAATTATGAGGCATTGGATTCGAGTCAAGCATGTGTGATTAGTGAACCGTGGAGCTGTGGAGCAAAAGACAGAGGTTTTCAAAAATTTAGTGGGTTGAAATTGCCAGATACTACAAGGTCTTGGATTGATCCAAATTTGACACTTGAGAATTGCAAGGCTAAATGCTTGCAAAATTGTTCTTGCATTGCATATGCAAGCTTAGATATCAGAGATGGTAGTGGTTGTATCTTTTGGACTGAAGCTTTGGTTGATTTAAGGGTGGCTTCAGTCCCGGGGCTAGATCTATATATTCGCATTACTGCTTCGGAAACAGAAGAAAAGAGAGGCTATAAGAAATTGGTAGCAGTGCTGATTCCAGTTATTCTCCTAACTTTTGTGATTTTTTTCATATTCACATATAGTTATTGGCGGAAAAGAAAGCTTAGAGAGAAAACCTCAGAAGAAAATAAAAATGAAGACTGTGAAGCAGACTTAGAGCTTCCTTTCTTTGATTTTGCTACAATAGTTCGTGCCACCAGCGATTTCTCAAGTGAAAATATGCTTGGCCAAGGTGGTTTTGGACCTGTGTATAGGGGAACACTCGCAAATGGACAAGAGATCGCTGCCAAGAGGCTTTGTAGTAATACTGGACAAGGAATGAAAGAATTCAAAAATGAAGTTATATTGTGTGCCAAACTTCAGCATCGGAATCTTGTAAAGCTTCTTGGTTGTTCCATCCAAGGAGAGGAAAAAGTTTTGGTCTATGAATACATGCCTAATAAAAGCTTAGACTACTTTCTCTTTGATTCTTCCAAAAGAGGACTCCTAAACTGGTCAAAGAGGTTGAACATTATACATGGCATTGCTCGGGGACTACTATATCTTCATCAAGATTCTAGATTAAGAATCATTCATAGAGATATGAAAGCAAGTAATATCCTGTTGGACAATGAGTTGAATCCAAAAATTTCAGATTTTGGTATAGCACGAATGTTTGGTGGAAATCAAACAGAAGGAAGTACAAAACAAGTTGTTGGAACATATGGATACATGGCACCAGAATATGCCATTAATGGACTGTTCTCTACCAAATCTGATGTATACAGCTTTGGAGTACTACTACTAGAGATAGTAAGTGGGAAGAAAAATGGAGGAATTCTGTTTCCAGATCATGGACTTAATTTATTAGGACATGCTTGGAGATTGTGGAAAGAGGAGACTCCTATGCAATTAGTTGATACTTCTTTGGGTGACACCTTTACCATATCAGAAGCATTACGGTGCATTCATGTTGGTCTTCTATGTGTGCAATTACATCCAGATAATAGGCCAAACATGGCATCAGTGATTTTTTTGTTGAGCAGTGAAAATATTTTGCCACAACCAAAAAGGAACCAGGTTTTCTTATTGGAAGGATGA 2364 0.3938 MVCYTFLFLFAELIMQFPSISSATDTFNGSQSLPDGTTLVSKDGTFEMGFFSPSNNNTTTNRYLGIWYKSIPVRTVVWVANRENPVKDNSSKLSISTQGKLVILSKNNTLVWSADTTEETKAQSLFVQLLDSGNLVLRDEKDSNPLNFLWESFDYPCDTFLPGMKIGWNLKKGLSWRLTAWKNWDDPSPGNFSWGMEPGNTRELVMWKGSSEYYRSGPWNGVRFSGKYTPRYNLEFNSSQDEVYYTYKFVSNSFITRVVLNQSLYSRQRYNWINENQTWSPYSVVPRDKCDNYNVCGPYGNCVGDEPLQCECLMGFKPKSVQNYEALDSSQACVISEPWSCGAKDRGFQKFSGLKLPDTTRSWIDPNLTLENCKAKCLQNCSCIAYASLDIRDGSGCIFWTEALVDLRVASVPGLDLYIRITASETEEKRGYKKLVAVLIPVILLTFVIFFIFTYSYWRKRKLREKTSEENKNEDCEADLELPFFDFATIVRATSDFSSENMLGQGGFGPVYRGTLANGQEIAAKRLCSNTGQGMKEFKNEVILCAKLQHRNLVKLLGCSIQGEEKVLVYEYMPNKSLDYFLFDSSKRGLLNWSKRLNIIHGIARGLLYLHQDSRLRIIHRDMKASNILLDNELNPKISDFGIARMFGGNQTEGSTKQVVGTYGYMAPEYAINGLFSTKSDVYSFGVLLLEIVSGKKNGGILFPDHGLNLLGHAWRLWKEETPMQLVDTSLGDTFTISEALRCIHVGLLCVQLHPDNRPNMASVIFLLSSENILPQPKRNQVFLLEG* 788
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1580 787 SUPERFAMILY Protein kinase-like (PK-like) 481 766 IPR011009 -
Pvu11g1580 787 Pfam S-locus glycoprotein domain 214 320 IPR000858 GO:0048544
Pvu11g1580 787 SUPERFAMILY alpha-D-mannose-specific plant lectins 76 187 IPR036426 -
Pvu11g1580 787 SMART blect_4 30 156 IPR001480 -
Pvu11g1580 787 CDD PAN_AP_plant 340 421 - -
Pvu11g1580 787 ProSiteProfiles Bulb-type lectin domain profile. 24 150 IPR001480 -
Pvu11g1580 787 Pfam PAN-like domain 341 407 IPR003609 -
Pvu11g1580 787 ProSitePatterns Serine/Threonine protein kinases active-site signature. 618 630 IPR008271 GO:0004672|GO:0006468
Pvu11g1580 787 Gene3D Hepatocyte Growth Factor 341 417 - -
Pvu11g1580 787 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 32 781 - -
Pvu11g1580 787 ProSiteProfiles PAN/Apple domain profile. 341 422 IPR003609 -
Pvu11g1580 787 SMART serkin_6 497 766 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu11g1580 787 Gene3D - 19 153 IPR036426 -
Pvu11g1580 787 CDD B_lectin 30 156 IPR001480 -
Pvu11g1580 787 Gene3D Phosphorylase Kinase; domain 1 457 572 - -
Pvu11g1580 787 Coils Coil 459 479 - -
Pvu11g1580 787 Gene3D Transferase(Phosphotransferase) domain 1 573 779 - -
Pvu11g1580 787 Pfam Protein tyrosine and serine/threonine kinase 500 714 IPR001245 GO:0004672|GO:0006468
Pvu11g1580 787 SMART ntp_6 343 421 IPR003609 -
Pvu11g1580 787 Pfam D-mannose binding lectin 75 182 IPR001480 -
Pvu11g1580 787 ProSiteProfiles Protein kinase domain profile. 497 784 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu11g1580 787 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 32 781 - -
Pvu11g1580 787 PIRSF SRK 1 786 IPR024171 GO:0004674
Pvu11g1580 787 CDD STKc_IRAK 503 765 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1580 Pvu-Chr11 39921004 39924543 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1580 460 787 Receptor kinase-like Gene Family AT4G11530 56.231 4.14e-127 393
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pvu11g1580 PK_Tyr_Ser-Thr 3e-44 CL0016