Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo9g02494 ATGATCCCGAACCACGCCATTAGGAGGATGATCCAGGACTGGTGCGTGGAGCACCGCTCCTACGGGATCGAGCGGATCCCCACTCCTCGGATCCCGGTCACCCCGTACGAGGTTGCCGACACGTGTACGAGGATCCTGTCGGCGGCGCAGCACGGGGACGAGAACAAGTGCGTGGAGTTGGTGAGGAAGATCAAGGCGTGGGGGAAGGAGAGTGAGAGGAATAAAAGATGCATAGTGGCCAATGGTGCTGCTCTAGCACTAGCTAACGCGTTTAACTCTTTCTCACGTGGGTTAAACATTGAGAAGAACGTGGTTGTGTTGGATGAGATTTTGGGGGCTTTGATATGGATGCGTCCTCTTTCTGAAGAGGGTAGATCCGTGTTGGGGTCAGCGAGTTCCATCTCTTGCATGGTTTCGTTCATGAATGGGAAACAATTGTCGACAAGGCAGAACGCTGCTTTGTTGCTTAAGGAGATGCGTGTGGAGGCGTTGGTGAAGTGTGTAGGGGTTGTTGAGGCTTTGGTTAACATGATCAAGGAGCCTGTTGGGAGTGGTTCCACCAAGGCGTGTTTGTCAACTATTTTCAACTTGGTTAATTCTTCTTCTTCGGGGGTTAATAGAGGTTTGACTTGTGAGAGATTTGTGGAACTGGGTTTGGTCCCGCTCTTGTTGGAGGTTCTTGTTGATGCGGAGAGAGGGGTGTGTGAGAAGGCTTTGGGGGTGTTGGATTGCGTTTGTGATTGTAAGCAAGGGGTGGAGATGGCCAAGGCCTAA 774 0.5181 MIPNHAIRRMIQDWCVEHRSYGIERIPTPRIPVTPYEVADTCTRILSAAQHGDENKCVELVRKIKAWGKESERNKRCIVANGAALALANAFNSFSRGLNIEKNVVVLDEILGALIWMRPLSEEGRSVLGSASSISCMVSFMNGKQLSTRQNAALLLKEMRVEALVKCVGVVEALVNMIKEPVGSGSTKACLSTIFNLVNSSSSGVNRGLTCERFVELGLVPLLLEVLVDAERGVCEKALGVLDCVCDCKQGVEMAKA 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo9g02494 257 Gene3D - 38 254 IPR011989 -
Pumo9g02494 257 ProSiteProfiles U-box domain profile. 1 21 IPR003613 GO:0004842|GO:0016567
Pumo9g02494 257 PANTHER WDSAM1 PROTEIN 1 255 IPR045185 GO:0061630
Pumo9g02494 257 SUPERFAMILY ARM repeat 44 248 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo9g02494 Pumo-Chr9 59608543 59610425 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo9g02494 2 253 U-box Gene Family AT5G37490 42.636 5.54e-59 191
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo9g02494 9 59608543 59610425 Pumo9g02494 9 59608543 59610425 ECH