Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g00288 ATGGATCAAGAAAGAGATTTTGCACTTACCCAGATGAGGAAATCCGTTGAGAAGCTTGGTTCTTCTGCAGAGGGGTATGGGGACCCTACGTTGATGAGGTTTTTGATTGCTCGATCAATGGAGGTGGATAAAGCAGCAAAGATGTTTGTGCAGTGGCACAAGTGGAGGTCTGCCACAGTGCCTAATGGATTCATTTCAGAATCTGAAATTCCAGATGAATTGGAAGCAAGGAAGATCTCCTTGCAGGGCTTGTCTCAGGATAAATTCCCTGTCATGATTGTTCACAGCAGCAGACATTTTCCTTCCAAGGACCAGATTCAATTCAAGAAATTTGTTGTATATGTACTGGACAAGACAATTGCAAGTGCTTTCAAAGGAAGGGAGATAGGAAATGAGAAGTTGATTGGGATTCTTGATCTGCAGAATATTTCATATAAAAATATTGATGCACGTGGGTTAATCACTGGATTTCAATTTTTACAGGCTTACTACCCTGAACGTTTAGCAAAGTGCTACATTTTACACATGCCATGGTTTTTTGTGAGTGTTTGGAAACTAGTTTCTCGCTTCCTAGAGAAGGCTACACTAGAAAAGATTGTAATTGTAACCAATGAGGATGAGACAAGGGAGTTTATTAGAGAGGTTGGTGAAGAGGTTCTCCCAGAAATGTATGGTGGAAGAGCTAAGCTTGTAGCCATCCAAGATGTTGAATTGGCACCGCTGGAAAACGGAACAACAAACTGA 744 0.4126 MDQERDFALTQMRKSVEKLGSSAEGYGDPTLMRFLIARSMEVDKAAKMFVQWHKWRSATVPNGFISESEIPDELEARKISLQGLSQDKFPVMIVHSSRHFPSKDQIQFKKFVVYVLDKTIASAFKGREIGNEKLIGILDLQNISYKNIDARGLITGFQFLQAYYPERLAKCYILHMPWFFVSVWKLVSRFLEKATLEKIVIVTNEDETREFIREVGEEVLPEMYGGRAKLVAIQDVELAPLENGTTN 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g00288 247 SUPERFAMILY CRAL/TRIO N-terminal domain 2 63 IPR036273 -
Pumo8g00288 247 PANTHER OS03G0850700 PROTEIN 5 236 - -
Pumo8g00288 247 Pfam CRAL/TRIO domain 78 226 IPR001251 -
Pumo8g00288 247 SMART sec14_4 73 229 IPR001251 -
Pumo8g00288 247 CDD SEC14 71 226 IPR001251 -
Pumo8g00288 247 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 67 232 IPR001251 -
Pumo8g00288 247 SUPERFAMILY CRAL/TRIO domain 68 229 IPR036865 -
Pumo8g00288 247 Gene3D - 1 237 IPR036865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g00288 Pumo-Chr8 8535615 8544608 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g00288 24 222 Acyl Lipid Metabolism Gene Families AT1G55840 24.413 9.86e-15 70.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo8g00288 8 8535615 8544608 Pumo8g00288 8 8535615 8544608 ECH