Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g00284 ATGGTATATTCCAAGGCTTTCATGTCTGGTTTCTTGTTACTGTTTGATGCATTGGACAAAGAAAATTACTTCATGTTCATGTGTGGTTTCTTGTTACTGTTTGATGCATTGGGCAAAGATAATGCCTTAGTGGTTGCTAAAGATTGGAGAGCAACATTGATTGAGTTTTACCACACGATTATAGAGCTTCTGATACTTTTCGAAGAGAGAGATATATCAAGGAAAAAAGAGAAGGCAGAGAGCAAGAAAGTGATAGATGTGATAAGTGATGAAATAAGAAAGAGAAAGAAAAGAAAATGGAGTGGAAGAAAAAGAGAAAGAAAGGCAAAAGAGTTAGCATTTAGGATGGGTAAAAGTAGGACAATTGAGTTGTATGGATTCCCTACTTCTGTGAACGTGACTGATGTAAAGATATTTGTAGAGCAGTATACTGGTGAAGGAACTGTGTTCCACATTAAGTTAAGACACGGAAAAGGTCGGGTTCCAAGAGCATTTGCTATTATTCAATTTACTGCCGCAAATTATGCTGCATCTATGATGTCCAAAGCTGACAACAATTTGAGAACATTGCGGTATGGGACCTCCTATTTAAAAGCTCGGGACATGGAAAGAGATATTGTGCCAAGGCCAAGAAAGGTTTTGCATAGTTTGGATGATGTGAAACTGTCTTTTGGCTGTCAGATCTCAAAGGGAAGATTCTCTGTTTTATGGAAAATGCTGGATGTTAGTGTAAATTTTGGGACTGGAATGAGAAAGATGCATTTCTTGTTTTCCCACAACAATATGCAATACAAACTTCAGCTTTCATATGAGAACATTTGGAAGATTGAGCTGCATCAATCACGTGTTGGAACTACACGTTATCTCTTGATTCAGTTACTTGGTGCTCCCCGGGTTTTCAAGAACGATGTACCTACATCAGCAAATATATTTGATAATCCTTTGTTCAACTACTACAAACATGTCCCTGATGAGCAATGGATCCGAGCAATTGATTTCACTCCTGATAGTTGTATTGGCCAGTCCTCTGCCTTATGTCTTGAGCTTCCTAGTGGCCTACAATTACCAAATTTCAGGGATAACTTTGCTTATTATGAGGAAAGTCAGGGGCAGTACACTTTAGAGACAGGAGTTCCCTTTTCTCAAAATTGGGGTCTTGTCCCCATTGTTGCTCCTCCTCAAGGTGTTAAAATACCTTATGACATCTTGTTTAAAGTCAATTCATTGGTTCAGCACGCGTGTCTTGCAGGACCTGCACTTGATGCTGACTTCTATCGCTTGGTTGATCCACGTAGAAAGCCCCTTGAATTTATTGAACACGCTTTAGAAAAAATGTACTATTCAAAGGAATTCTGTTATGAACCGACAAAGTGGATGACTGACCAGTACAGAACGTACCGTAAATCAAAGAATCGTCCTCGGTCACGTGCAAAATCCTTGGATACAGGTTTGGTATATGTTCGCAGGGTTCAGATCACACCTTGCAAAGTATACTTCTGTGATCCAAAGATTAATGTCTCAAATCGTGTTCTCCGTCATTTCCATAAACACATTGATAACTTTCTACGTGTTTCATTTGTCGATGAGGAGTTGGAGAAACTGTTTTCAACTGATTTATCATCACGTGGACAGAACAAGAAAACTGGGATATACACCAGAATTCTTTCCATCCTTAAGAATGGCATAGTTATTGGTGATAAGAAGTTTGAATTTCTAGCATTCTCATCAAGTCAGTTGCGGGAAAACTCTCTATGGATGTTTGCTCCTACAGGAACTGGATGTACTGCTGCTTCCATAAGGGAATGGATGGGAAATTTTAGCCAGATTAGGAATGTTGCTAAATATGCTGCTAGGCTGGGACAATCTTTTGGTTCCTCTACTGAAACTCTAAGCGTCCATAGGGATGAAGTTGAAATTATTCCTGATGTGAAGAAGCTTACATATGATGGAGATGAATATGTCTTCTCTGATGGAATTGGGAAAATATCTCTTAAATTTGCCCGGAGAGTAGCTAAAAAATGTGGTTATGATTCCACTCCATCTGCCTTTCAGATTCGATATGGTGGGTACAAAGGAGTTGTGGCTGTTGACCCAACATCATGTTATAAGTTATCACTGAGGAGGAGCATGCGGAAGTATGAATCAGATAACACAAAGTTAGATTTAGCATTTAGGATGGGTAAAACAATTGAGTTGTACGGATTCCCTACTTCTGTGAACGTGTCTGATGTAAAGACATTTGTAGAGCAGTATACTGGTGAAGGAACTGTGTTCGCCATCAAGTTAAGACACGGAAAAGGTCGGGTTCCAAGAGCATTTGCTATTATTCAATTCACTGCTGCAAATTATGCTGCATCTATGATGTCCATAGCTAACAACATTTTGAGAACATTGCGGTATGGGACTTCCCATTTAAAAGCTCGGGAAATGGAAAGAGATATTGTGCCAAGGCCAAGAATGCTTTTGCACAGTTTGGATGATGTGAAACTGTCTTTTGGCTGTCAGATCTCAAAGGGAAGATTCTCTGTTTTATGGAAACAGCTGGATGTTAGTGTAAATTTTGGGACTGGAATGAGAAAGATGTATTTCTTATTTTCCCACAACAATGTGCAATACAAACTTCAGCTTTCATATGAGAACATTTGGAAGATTGAGCTGCATCGACCACGGGTTGAAACTACTCGTTATCTCTTGATTCAGTTACTTGGTGCTCCCCGGGTTTTTGAGAACGATGTACCTACATCAGCAAATATATTTGAAAATATATTTGATAATCCTTTGTTCAACTACTTCAAAGATGTCCCTGATGAGCAATGGATCCGAGCAATTGATTTCACTCCTGATAGTTGTATTGGCCAGTCCTCCGCCATATGTCTTGAGCTTCCTAATGGCCAACAATTACCAAATTTCAGGGATAACTTTGCTAATTATGAGGAAAGTCTGGGGCAATACACTTTACAGACAGGAGTTCCCTTTTCTCAAAATTGGGGTCTTGTCCCCATTGTTGCTCCTCCTCAAGGTGTTAAAATACCTTACGACATCTTGTTTAAAGTCAATTCATTGGTTCAGCACGCATGGCTTGCAGGACCTGCACTTGATGGTAACTTCTATCGCTTGGTTGATCCATGTAGAATGCCCCTTGAATTTATTGAACATGCTTTAGAAAAAATGAACTATTCAAAGGAATTCTGTTATGAACCCACAAAGTGGCTGACTGATCAGTACAGAACATACCTTAAATCAAAGAATCGTCCTCAGTCACCTGCAATATCCTTGGATACAGGGTTGGTATACGTTCGCAGGGTTCAGATCACACCTTCCAAAGTATACTTTTGTGGTCCAGAGATTAATGTCTCAAATCGTGTTCTCCGTCATTTCCATGAACACATTGATAACTTTCTACGTGTTTCATTTGTCGATGAGGAGTTGGAGAAACTGTTTTCAACTGATTTATCATCACGTGGACAGAACAAGAAAACTGGGATATACACCAGAATTCTTTCCATCCTTAAGAATGGCATAGTTATTGGTGATAAGAAGTTTGAATTTCTAGCATTCTCATCAAGTCAGTTGCGGGACAACTCTCTCTGGATGTTTGCTCCTACAGGAACTGGATGTACTGCTGCTTACATAAGGGAATGGATGGGAAATTTTAGCCAGATTAGGAATGTTGCTAAATATGCTGCTAGGCTGGGACAATCTTTTGGTTCATCTACTGAAACTCTAAGTGTCCATAGGGATGAAGTTGAAATTATTCCTGATGTGAAGAAGCTTACATATGATGGAGATGAATATGTCTTCTCTGATGGAATTGGGAAAATATCTCTTGAATTTGCCCGGAGAGTAGCTAAAAAATGTGGTTATGATTCCACTCCATCTGCCTTTCAGATTCGATATGGTGGGTACAAAGGAGTTGTGGCTGTTGACCCAACATCACGTTATAAGTTATCACTGAGGGGGAGCATGCTGAAGTATGAATCAGATAACACAAAGTTAGATGTTTTGGCCCGTAGTAAATTTCAGCCATGTTATCTGAATCGGCAGTTAATTTCTCTGTTATCCACTCTTGGTATCAAGGATGGTGTTTTTGAGAAAAAACAAAGAGAAGCTGTTGATCAACTGAACACTATACTAACAGATTCATTAAAGGCACAAGAAGTTCTGGACTTAATGTCTGCTGGGGAGATCACTAATGTTCTGAAGGAGATGCTCATTTGTGGCTACAAGCCTAATGAAGAACCATTCCTTTCAATGATGCTGCAAACATTTAGGGCATCAAAACTGCTGGAATTGCGACTCAAATCCAGGATCTTTATTCCAAAAGGAAGAGCAATGATGGGATGCCTAGATGAAACTAGAACCCTAGAATATGGCCAAGTATTTGTTCAGTTCTCTAACAATAGGCTGCGGAATCTGTCTGATGATTTTCTTCCATATGATTTGCCAAAGAATTATATGGTTACTGGTAAGGTAGTAGTAGCCAAAAACCCCTGCCTGCACCCAGGTGATGTGCGTGTTTTACAGGCTGTGGATGTGCCAGCTTTGCACCACATGGTGGACTGTGTTGTTTTCCCTCAAAAAGGAAAAAGACCTCATCCAAATGAGTGTTCGGGAAGCGATCTGGATGGAGATATCTACTTTGTTTGTTGGGACCCTGAATTGATTCCTTCTCGCCCAATTGAACCAATGGACTATACTGCTCCTGAAACTATGAAATTGGATCATGATGTGATGATTGAGGAGGTTGAGGAGTATTTTGCCAATTACATAGTCAATGACAGTCTGGGAATCATTGCCAATGCACACACTGTCTTTGCAGATAAAGAACATTTGAAAGCAATGGCTGAGCCATGTATTAAGCTTGCAAAGCTGTTTTCAACAGCAGTTGACTTTCCAAAAACTGGTGTTCCAGCTGTTATTCCTCGTGAACTTTATGTCAAAGAATATCCTGACTTCATGGAGAAGCCTGACAAACCCACCTATGAATCGCGTAACGTGATAGGAAAGCTCTTTAGGGAAGTGAAAGAAATTTCAACAAGTGCTGGCTCAATTACATCCTTCACTCATTTGGTCGCAGGACGGTCTTATGACCGTGACATGGAAGTTGATGGCTTCATGGATTATGTTGATGATGCTTTCTCTCACAAAACCAATTATGACTACAAGTTGGGAAATCTGATGGACTACTATGGGATCAAAACTGAAGCTGAAATCCTCAGTGGGAATATTATGAATATGTCAAAATCTTTCAACAAAAGGAGGGATGCAGAATCTATCAATATGGCCGTGAAGTCCCTAAGGAAAGAGGCCAGAACCTGGTTCAATGAAAGTAGCAGTGGTGGTGTAGATTCGGAGAGTGATGATGTGTATGCAAAAGCTTCTGCTTGGTACTATGTGACTTATCATCCAAGTTACTGGGGTTGTTACAATGAAGGGATGGATAGGGATCATTATCTAAGTTTCCCATGGTGTGTTTACCCTCATCTTGTCCAAATCAAGAAGGAGAAAGTCAGCATTAGAAGGTCCTCTTTGGAATACAGTTTCAGTGGGTTGCGTTTGAATTGA 5565 0.3998 MVYSKAFMSGFLLLFDALDKENYFMFMCGFLLLFDALGKDNALVVAKDWRATLIEFYHTIIELLILFEERDISRKKEKAESKKVIDVISDEIRKRKKRKWSGRKRERKAKELAFRMGKSRTIELYGFPTSVNVTDVKIFVEQYTGEGTVFHIKLRHGKGRVPRAFAIIQFTAANYAASMMSKADNNLRTLRYGTSYLKARDMERDIVPRPRKVLHSLDDVKLSFGCQISKGRFSVLWKMLDVSVNFGTGMRKMHFLFSHNNMQYKLQLSYENIWKIELHQSRVGTTRYLLIQLLGAPRVFKNDVPTSANIFDNPLFNYYKHVPDEQWIRAIDFTPDSCIGQSSALCLELPSGLQLPNFRDNFAYYEESQGQYTLETGVPFSQNWGLVPIVAPPQGVKIPYDILFKVNSLVQHACLAGPALDADFYRLVDPRRKPLEFIEHALEKMYYSKEFCYEPTKWMTDQYRTYRKSKNRPRSRAKSLDTGLVYVRRVQITPCKVYFCDPKINVSNRVLRHFHKHIDNFLRVSFVDEELEKLFSTDLSSRGQNKKTGIYTRILSILKNGIVIGDKKFEFLAFSSSQLRENSLWMFAPTGTGCTAASIREWMGNFSQIRNVAKYAARLGQSFGSSTETLSVHRDEVEIIPDVKKLTYDGDEYVFSDGIGKISLKFARRVAKKCGYDSTPSAFQIRYGGYKGVVAVDPTSCYKLSLRRSMRKYESDNTKLDLAFRMGKTIELYGFPTSVNVSDVKTFVEQYTGEGTVFAIKLRHGKGRVPRAFAIIQFTAANYAASMMSIANNILRTLRYGTSHLKAREMERDIVPRPRMLLHSLDDVKLSFGCQISKGRFSVLWKQLDVSVNFGTGMRKMYFLFSHNNVQYKLQLSYENIWKIELHRPRVETTRYLLIQLLGAPRVFENDVPTSANIFENIFDNPLFNYFKDVPDEQWIRAIDFTPDSCIGQSSAICLELPNGQQLPNFRDNFANYEESLGQYTLQTGVPFSQNWGLVPIVAPPQGVKIPYDILFKVNSLVQHAWLAGPALDGNFYRLVDPCRMPLEFIEHALEKMNYSKEFCYEPTKWLTDQYRTYLKSKNRPQSPAISLDTGLVYVRRVQITPSKVYFCGPEINVSNRVLRHFHEHIDNFLRVSFVDEELEKLFSTDLSSRGQNKKTGIYTRILSILKNGIVIGDKKFEFLAFSSSQLRDNSLWMFAPTGTGCTAAYIREWMGNFSQIRNVAKYAARLGQSFGSSTETLSVHRDEVEIIPDVKKLTYDGDEYVFSDGIGKISLEFARRVAKKCGYDSTPSAFQIRYGGYKGVVAVDPTSRYKLSLRGSMLKYESDNTKLDVLARSKFQPCYLNRQLISLLSTLGIKDGVFEKKQREAVDQLNTILTDSLKAQEVLDLMSAGEITNVLKEMLICGYKPNEEPFLSMMLQTFRASKLLELRLKSRIFIPKGRAMMGCLDETRTLEYGQVFVQFSNNRLRNLSDDFLPYDLPKNYMVTGKVVVAKNPCLHPGDVRVLQAVDVPALHHMVDCVVFPQKGKRPHPNECSGSDLDGDIYFVCWDPELIPSRPIEPMDYTAPETMKLDHDVMIEEVEEYFANYIVNDSLGIIANAHTVFADKEHLKAMAEPCIKLAKLFSTAVDFPKTGVPAVIPRELYVKEYPDFMEKPDKPTYESRNVIGKLFREVKEISTSAGSITSFTHLVAGRSYDRDMEVDGFMDYVDDAFSHKTNYDYKLGNLMDYYGIKTEAEILSGNIMNMSKSFNKRRDAESINMAVKSLRKEARTWFNESSSGGVDSESDDVYAKASAWYYVTYHPSYWGCYNEGMDRDHYLSFPWCVYPHLVQIKKEKVSIRRSSLEYSFSGLRLN 1854
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g00284 1854 PANTHER RNA-DEPENDENT RNA POLYMERASE 120 721 IPR007855 GO:0003968
Pumo8g00284 1854 CDD RRM_SF 122 191 - -
Pumo8g00284 1854 Pfam RNA dependent RNA polymerase 492 721 IPR007855 GO:0003968
Pumo8g00284 1854 Pfam RNA dependent RNA polymerase 1104 1674 IPR007855 GO:0003968
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g00284 Pumo-Chr8 8439423 8505562 Dispersed/Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo8g00284 8 8439423 8505562 Pumo8g00284 8 8439423 8505562 ECH