Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g00277 ATGGAAGCTAGGCAAATTATAGAAAATGGATCGGGGAGAAAGGGGGTTGAGGAGGGAAGTGATGTTGAGAAAGAAAATGAAGAGGTTCTAAAGAAGATTATTGCAAGCCATCCTTTGTATGAAGTTTTGATTGAATCACACATCAACTGCTTGAAGGTGGGATTAAGCGAAGCTGGAGAGTTTGACGCAACAAGTGATGCATGGAAGAAGCTGGTTAACTCGAAATCCAAAGCAACTCCAAGTCCAAACACTTCAGAGTTAGATCACTTCATGGAAGCGTATTGCATGGCACTGAACAAGCTGAGGGAAGCGATAGAGGAACCAACAAAAGAAACGAATGCTTTCATCAGAGCTACGCATTCTTCAACTAAAAGAACTCAATGA 384 0.4167 MEARQIIENGSGRKGVEEGSDVEKENEEVLKKIIASHPLYEVLIESHINCLKVGLSEAGEFDATSDAWKKLVNSKSKATPSPNTSELDHFMEAYCMALNKLREAIEEPTKETNAFIRATHSSTKRTQ 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g00277 127 SMART KNOX2_2 74 124 IPR005541 GO:0003677|GO:0005634
Pumo8g00277 127 Pfam KNOX2 domain 85 121 IPR005541 GO:0003677|GO:0005634
Pumo8g00277 127 Pfam KNOX1 domain 30 54 IPR005540 GO:0003677|GO:0005634
Pumo8g00277 127 PANTHER HOMEOBOX PROTEIN KNOTTED-1-LIKE 6 ISOFORM X1 1 121 - -
Pumo8g00277 127 SMART KNOX1_2 28 70 IPR005540 GO:0003677|GO:0005634
Pumo8g00277 127 MobiDBLite consensus disorder prediction 1 22 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g00277 Pumo-Chr8 8277809 8280057 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g00277 28 117 Homeobox Transcription Factor Family AT4G08150 36.170 7.76e-13 62.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo8g00277 8 8277809 8280057 Pumo8g00277 8 8277809 8280057 ECH