Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g00269 ATGACAACCAGATCGAGAAAATCGAAGCGCAAGCTCGAACCGGAGCCACCTCCGTTCACCATTACCAAGAAGCTCCGGCAGAGGCTCCCTCGCCGGCGACGGCAAAACATCTCGCCGGTGCTCCTCGTCAGCATCTCCCGCCAGAATCCTCGTTTCTCCGTCGATTCCAGCTCCGGCTCCGACTTCGCCGCCGGCGAAGCCTCTTGCAACTCAAGCAGAGCTTCCGTCGCCGGCAAGAGAAAGGCGAACTCGAGAAACGAATTCTCAATCGATTCCACGAGAAATCGGAAATTCGAGAAGCGAAACGAGAACGAAGTGGAAGTGTCGGAGTCTTCGTGCGTGGACTCTGCTTCGTTCGCTGGCGAACGAAGTGAACGAAGCAGAAGCTTGATTCTGAAGTTCAAAAGAGAAAATAAGAATCCGAAGGAAAACGACGACGTTTCGTGCGAGAAATCAGAGATTACTACTATTCTGAAGTTCAAAAGCGGAAGCGAGAGCAAGAATCTAAAAGAAAACGACGACGTTTCGTGCGCGAAGTCAGAGATCACTAGCGAGGAACAGTTCAATTCAAAGTCCTCCGGTAACGGTAACGGAAACATCAAAATCTCTTCGGAGTCAAACGCGAACGACGTCGTGTGGTTTAGTTCCGGTGTTCGCGCGTCGTTTCATGAGGAAAATAATAGAAACAAGGAAAACACTGAAAACAGAGCATCGGAATGTGAATACTCTCAAGGTTCTAGAAGCCTCCACGCGGAAGAGAATTGCGCGGACTTAATAGCGCAATCGATGACGAATCAGGAATCGGATATTTACGACGTCGTTGCGGATCTCGCTTGCTCTGAGGATCTGCGTTTCTCGTACTGTGACGACGACGAATCGGAGTACTGTTCTAGCCAGGGAACTGTGTTCTCTGAATTTCATTCTGAGATTTTCGGCGAATGCTCGCAGCCGGAGCTTTCGGATTTTTCTCCATCGCTGTTTGTGGATTCCGGAAGCCAGTTTTCGGAGGGATCCGTCGGAGAAACTCCTTCGCCGACGTATTTGTTGTTCCTTCAGTACCGTAAGGAGTTCACCGCGCTTGTTTCTGCTTCTCCAGTGATGAACGCTTCAAGCGTTGTAGAAGATGTTGTCAATTTTGTGAGATTCGAAGATTCGGATGACGAAGACAGCTACCAGATGCTGAGGAAGAGGGAGAGGAGGCAAGGTTTTGTGTCGAATTATAGTGAGAGATATTTCTCTACCACTGAATTCGGAGACACCGTGATTGAGCAACGTGCGCAAATGGTTCACTGGATTGTTGAGCAATCTTATCGAAGACAGCTTCGGCAAGAGACAGTGTTTCTTGGAGTCAACCTACTTGACCGTTTCCTAAGCAAAGGATACTTCAAAGCCAAAAGAAACCTTCAAATTGTTGGAATAGCTTGCCTCACGTTAGCGACCAGGATCGAAGAAAACCAGCAATATAACAGAGTGGGGCAAAAAAATTTCTACATAGGAAGCAATGTGTACAGTAGATGCGAGGTGGTAGCTATGGAATGGGTGGTGCAGGAGGTGCTCAAGTTTCAGTGCTTTCTGCCTACCAGCTACAATTTCTTGTGGTATTACCTAAAGGCAGCTAATGTTGATGCAGTCGTTGAGAAGAGGGTCAAGTATCTGGCAGTGCTGGCACTGTCAGGTCATGAGCAACTGTGCTACTGGCCTTCAACAGTTGCTGCAGCACTTGTAATCCTGGCTTGTCTTGAAGTCAATCAAATTTCATCCATCAAAATCATAGGGATCCACGTTAGATCAAAAGATGAGAATTTGTATGAATGCATAGAGACATTGTCTTTTGTTGCCTCCTTGCAACCTTCTATCATATTTGGTCACTAG 1872 0.4754 MTTRSRKSKRKLEPEPPPFTITKKLRQRLPRRRRQNISPVLLVSISRQNPRFSVDSSSGSDFAAGEASCNSSRASVAGKRKANSRNEFSIDSTRNRKFEKRNENEVEVSESSCVDSASFAGERSERSRSLILKFKRENKNPKENDDVSCEKSEITTILKFKSGSESKNLKENDDVSCAKSEITSEEQFNSKSSGNGNGNIKISSESNANDVVWFSSGVRASFHEENNRNKENTENRASECEYSQGSRSLHAEENCADLIAQSMTNQESDIYDVVADLACSEDLRFSYCDDDESEYCSSQGTVFSEFHSEIFGECSQPELSDFSPSLFVDSGSQFSEGSVGETPSPTYLLFLQYRKEFTALVSASPVMNASSVVEDVVNFVRFEDSDDEDSYQMLRKRERRQGFVSNYSERYFSTTEFGDTVIEQRAQMVHWIVEQSYRRQLRQETVFLGVNLLDRFLSKGYFKAKRNLQIVGIACLTLATRIEENQQYNRVGQKNFYIGSNVYSRCEVVAMEWVVQEVLKFQCFLPTSYNFLWYYLKAANVDAVVEKRVKYLAVLALSGHEQLCYWPSTVAAALVILACLEVNQISSIKIIGIHVRSKDENLYECIETLSFVASLQPSIIFGH 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g00269 623 SUPERFAMILY Cyclin-like 526 611 IPR036915 -
Pumo8g00269 623 MobiDBLite consensus disorder prediction 1 17 - -
Pumo8g00269 623 Gene3D - 518 618 - -
Pumo8g00269 623 MobiDBLite consensus disorder prediction 1 39 - -
Pumo8g00269 623 MobiDBLite consensus disorder prediction 51 80 - -
Pumo8g00269 623 ProSitePatterns Cyclins signature. 425 456 IPR006671 -
Pumo8g00269 623 SUPERFAMILY Cyclin-like 384 522 IPR036915 -
Pumo8g00269 623 MobiDBLite consensus disorder prediction 181 203 - -
Pumo8g00269 623 MobiDBLite consensus disorder prediction 224 243 - -
Pumo8g00269 623 Pfam Cyclin, N-terminal domain 420 522 IPR006671 -
Pumo8g00269 623 MobiDBLite consensus disorder prediction 167 203 - -
Pumo8g00269 623 SMART cyclin_7 530 611 IPR013763 -
Pumo8g00269 623 SMART cyclin_7 430 517 IPR013763 -
Pumo8g00269 623 Pfam Cyclin, C-terminal domain 526 610 IPR004367 -
Pumo8g00269 623 Gene3D - 419 517 - -
Pumo8g00269 623 PANTHER CYCLINS 336 609 IPR039361 -
Pumo8g00269 623 MobiDBLite consensus disorder prediction 51 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g00269 Pumo-Chr8 7642780 7647928 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g00269 389 584 Core Cell Cycle Gene Families AT5G11300 33.168 9.25e-22 96.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo8g00269 8 7642780 7647928 Pumo8g00269 8 7642780 7647928 ECH