Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo8g00249 ATGGGAGGGGGTCACATGGGGTGCTGGTTCCTCTTCTGTTGTTGTTCTTCTCTCCTTCTTTTTGTTGCTTCTTCTGGCTCACCCAGAAGAAACTTCCCCATCATAGCCTTTGAGGATGGCTACACCCCCTTGTTTGGGGACCATAATTTGGCCATCCATAGAGATGGCAAATCAGTTCACCTTTCACTTGATGAAAGAACAGGTTTTTTCCTTTTATTTTTTTCTTATATGATGACCCTTTTTATTTTTGTTTTTAATCTTTTCTGGGTTGTGATTACAGGTTCTGGATTTGTGTCTCATGACCTTTACCTTCACGGCTATTTCAGTGCCTCGATTAAGTTGCCTGCTGATTACACTGCTGGAGTTGTGGTTGCATTTTATATGTCAAATGGTGACATGTTCCAGAAGAACCATGATGAGATAGACTTTGAGTTTTTGGGGAACATTAGAGGCAAAGACTGGAGGATTCAGACCAATGTTTATGGCAATGGAAGCACCAGCATTGGTAGAGAAGAAAGATATGGCCTTTGGTTTGATCCTGCTGAGGATTTCCATCAGTACAGTATTCTTTGGACAGATTCTAAGATCATGTATGATGCAATCTATTTGAATCCCACATGCCATTTTTGGTTATTACATTTTCCTTGTTATGGCACTAGTTTCTTTACCTGTCCTTTTATTGCCTTTTATACTCTAACAATCCCTTGCTTTGATGGAGTGGTTTGA 726 0.4022 MGGGHMGCWFLFCCCSSLLLFVASSGSPRRNFPIIAFEDGYTPLFGDHNLAIHRDGKSVHLSLDERTGFFLLFFSYMMTLFIFVFNLFWVVITGSGFVSHDLYLHGYFSASIKLPADYTAGVVVAFYMSNGDMFQKNHDEIDFEFLGNIRGKDWRIQTNVYGNGSTSIGREERYGLWFDPAEDFHQYSILWTDSKIMYDAIYLNPTCHFWLLHFPCYGTSFFTCPFIAFYTLTIPCFDGVV 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo8g00249 241 ProSiteProfiles Glycosyl hydrolases family 16 (GH16) domain profile. 22 241 IPR000757 GO:0004553|GO:0005975
Pumo8g00249 241 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED 36 197 IPR044791 GO:0004553
Pumo8g00249 241 Gene3D - 23 200 - -
Pumo8g00249 241 Pfam Glycosyl hydrolases family 16 40 198 IPR000757 GO:0004553|GO:0005975
Pumo8g00249 241 SUPERFAMILY Concanavalin A-like lectins/glucanases 93 197 IPR013320 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo8g00249 Pumo-Chr8 7191088 7192354 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo8g00249 16 224 Glycoside Hydrolase AT2G01850 56.881 2.26e-77 235
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo8g00249 8 7191088 7192354 Pumo8g00249 8 7191088 7192354 ECH