Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g00165 ATGGACGACATGAAAGACAAGGTGAAGGGCTTCATGAAGAAAGTCAACAACCCTTTCACCTCTTCTTCATCTGGCAAATTCAAGGGCCAAGGTAGAGTCCTTGGTTCTGCTTCTTCTTCTTCTTCTACACCCGCTAATTCCAATCCTACCCCTCGCCCCATTCCTACGCACAACCCTATTTCCAAACCCTCTTCAGCCACAACCAATCCCAAACCCTTGCCCCAGAAAACGGACCAAATTAGAACCACCGAGAAGCCTCGCAAAGATGATGGCTTTGACCCCTTTGATTCTCTGGTCACTAATTCCAACAGATCAAAAAATGGGTATTCAGTGAACGTCTTTGAATGCCCCGTTTGTAAACAACCATTCAGATCCGAAGAAGAGGTGTCTGCACACGTGGATGGTTGTTTGAGTAACCCTGTTGAGCGTGGAGGTGACGATGGAAATGGGGTCTCAGAGAGTGAGGTTGGGTCTGATACTAATAGTGAATTGGAGGTTTGTGTTGGGACTTACATTTCAGGGAACCCATCTGAGGGATCGGTTGATGTTGTTCTCAAACTGTTGAGGAATATTGGCAGGGAACCTGAGAATGTGAAGTTCAGGAGGGTCAGGATGAATAATCCCAAGATAAAAGAGGCTGTTGGTGATGTTGCGGGGGGAGTTGAGTTGCTGAGTTTCGTAGGGTTTGAACTCATGGAGGAGAATGGAGAGACATGGGCAGTGATGGAGGTTCCCACAGAGGACCAAATAAAATTCATTAAGAAAGCGATAGTGTTGCTGGAATCGCAACTTGTGCAAGGACCTCCAAAGAGAGAGGATTCGGCACCGGCAACTTCTGCTGAGATGGGTCCAAAGGCTGAACCAAAGCCGGTCGACAGACAGGTGAAGGTCTTCTTTGCTGTCCCTGAAAGTGTTGCAGCTAAAATTGAGCTACCAGATTCCTTCTATAACCTTTCAGCTGAAGAGGTCAGAAGAGAAGCTGAATTAAGGAGAAAAAAGATTGCAGATTCTCAGCTTTTAATCCCTAAGTCACTTAAAGAAAAGCAAGCAAAAGCTTCCAGGAAGAGATACACAAAAACTATTATCAGGATTCAATTTCCAGATGGAGTTGTACTTCAAGGTGTATTTGCTCCATGGGAAACAACTACTGCTCTCTACGAGTTTGTCAGCTCAGCATTAAAAGAACCAGGTTTGGAATTTGAGCTAATGCATCCTGTACTTATCCAACGGCGTGTGATCCCTCATTTTCCAAAAGCAGGGGAAAATGCTAAAACAATAGAGGATGAGGACCTGGTACCTTCTGCTCTAATCAAGTTCAAGCCCCTGGAAACAGATTCTGTTGTTTTCACCGGTCTCAGAAATGAATTGCTTGAAATCAGTGAACCACTTGTATAA 1395 0.4495 MDDMKDKVKGFMKKVNNPFTSSSSGKFKGQGRVLGSASSSSSTPANSNPTPRPIPTHNPISKPSSATTNPKPLPQKTDQIRTTEKPRKDDGFDPFDSLVTNSNRSKNGYSVNVFECPVCKQPFRSEEEVSAHVDGCLSNPVERGGDDGNGVSESEVGSDTNSELEVCVGTYISGNPSEGSVDVVLKLLRNIGREPENVKFRRVRMNNPKIKEAVGDVAGGVELLSFVGFELMEENGETWAVMEVPTEDQIKFIKKAIVLLESQLVQGPPKREDSAPATSAEMGPKAEPKPVDRQVKVFFAVPESVAAKIELPDSFYNLSAEEVRREAELRRKKIADSQLLIPKSLKEKQAKASRKRYTKTIIRIQFPDGVVLQGVFAPWETTTALYEFVSSALKEPGLEFELMHPVLIQRRVIPHFPKAGENAKTIEDEDLVPSALIKFKPLETDSVVFTGLRNELLEISEPLV 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g00165 464 SUPERFAMILY PUG domain-like 176 262 IPR036339 -
Pumo6g00165 464 MobiDBLite consensus disorder prediction 1 106 - -
Pumo6g00165 464 PANTHER PLANT UBX DOMAIN-CONTAINING PROTEIN 2 1 463 - -
Pumo6g00165 464 Pfam PUB domain 178 251 IPR018997 -
Pumo6g00165 464 MobiDBLite consensus disorder prediction 15 47 - -
Pumo6g00165 464 CDD PUB 177 257 - -
Pumo6g00165 464 Pfam UBX domain 356 406 IPR001012 GO:0005515
Pumo6g00165 464 MobiDBLite consensus disorder prediction 267 289 - -
Pumo6g00165 464 MobiDBLite consensus disorder prediction 138 159 - -
Pumo6g00165 464 FunFam Plant UBX domain-containing protein 2 173 259 - -
Pumo6g00165 464 MobiDBLite consensus disorder prediction 78 94 - -
Pumo6g00165 464 Gene3D - 349 442 - -
Pumo6g00165 464 ProSiteProfiles UBX domain profile. 355 439 IPR001012 GO:0005515
Pumo6g00165 464 SMART PGNneu 179 246 - -
Pumo6g00165 464 Gene3D - 174 260 - -
Pumo6g00165 464 Gene3D Classic Zinc Finger 110 141 - -
Pumo6g00165 464 FunFam UBX domain-containing protein 6 349 440 - -
Pumo6g00165 464 MobiDBLite consensus disorder prediction 59 77 - -
Pumo6g00165 464 SUPERFAMILY Ubiquitin-like 327 439 IPR029071 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g00165 1 387 C2H2 Transcription Factor Family AT2G01650 56.448 1.25e-147 424
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g00165 6 1933024 1938977 Pumo6g00165 6 1933024 1938977 ECH