Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g00150 ATGGCCGACGCTCTCTCTTTGATTCCGGCAGCCGTGCTTCGCAACCTTGCTGATAAGCTCTACGAGAAGCGCAAAAATGCTGCTCTTGATATTGAGGGGATAGTGAAGCAGCTAGCTGCTGCTGGGGATCATGATAAAATAACGGCTGTGATCAATTTGTTGACTACGGAATTTACTTATTCACCTCAAGCCAATCACCGGAAGGGAGGATTGATAGGATTAGCAGCTGCAACTGTTGGGTTGACTTCTGAAGCAGCTCAGCATCTTGAGCAAATTGTGCCCCCTGTGTTAAATTCTTTCTCTGACCAAGATAGCAGAGTTCGTTATTATGCTTGTGAAGCACTTTATAACATAGCCAAGGTTGTGAGAGGGGATTTTATTATTTTCTTCAACCAGATCTTTGATGCCTTATGCAAGCTTTCTGCAGACTCAGATGCCAATGTACAAAGTGCTGCTCACCTTTTAGATAGGCTTGTGAAGGATATTGTGACCGAAAGTGATCAGTTCAGTATTGAAGAATTCATACCACTGCTGAGGGAGCGCATGAATGTGTTGAATCCATATGTCCGCCAATTTTTGGTAGGATGGATTACTGTATTGGACAGTGTCCCAGATATTGATATGCTGGGTTTTCTTCCTGATTTTCTTGATGGCTTGTTTAATATGTTGAGTGATTCGAGTCATGAAATACGTCAACAAGCTGATTCAGCTCTTTCAGAGTTTCTTCAAGAGATTAAAAACTCCCCATCTGTAGATTATGGTCGCATGGCTGAAATCCTGGTACAGAGGGCAGGTTCTCCAGATGAATTTACTAGGCTAACAGCTATCACATGGATAAATGAGTTTGTCAAGCTTGGTGGAGACCAGCTTGTTCCATATTATGCTGACATTCTTGGAGCCATTTTGCCTTGTATAGCAGATAAAGAAGAGAAAATTAGAGTTGTTGCTCGTGAAACCAATGAAGAGCTACGTGCCCTCAAGGCGGATCCAGCTGAAGCGTTTGATGTAGGAGCAATCCTCTCCATTGCCAGGAGGCAATTATCTAGTGAATGGGAGGCTACTCGAATCGAAGCTTTGCACTGGATATCAACCCTTTTAAACAAATATCGTACCGAGGTTTTGCAATTTCTGAATGACATATTTGACACCCTGCTCAAGGCACTTTCAGATCCATCTGATGAGGTTGTTCTTCTGGTTCTTGATGTTCATGCATGCATTGCAAAAGATCCTCAGCTCTTTCGGCAACTTGTTGTCTTCCTGGTGCACAATTTCCGGGTAGACAATTCCCTTTTGGAGAAGCGTGGTGCTTTGATAATTCGTCGGCTTTGTGTGCTTTTGAATGCTGAGAGAGTCTACCGTGAACTTTCTACAATACTAGAAGGGGAATCTGACTTGGATTTTGCATCAATTATGGTTCAGGCTTTGAATTTGATCTTACTTACATCATCGGAACTTTCTGAGATTCGAGATCTTTTGAAGCAATCACTGGTAAATCCTGTTGGGAAGGATTTATATGTTTCTTTGTATGCCTCGTGGTGCCATTCTCCAATGGCAATTATAAGTCTGTGCTTATTAGCTCAGACTTACCAACATGCGAGTGCTGTGATTCAATCTCTGGTTGAGGAGGATATTAATGTCAAATTCTTAGTCCAGCTGGATAAATTGATTCGGTTGCTGGAAACTCCAATCTTTGCTTATCTAAGATTGCAGCTTCTCGAACCTGGAAGATATACATGGTTATTCAAAGCATTGTATGGTCTTCTGATGTTGCTTCCTCAGCAAAGTGCTGCCTTCAAGATTCTCAAAACTCGTTTAAAAGCTGTGCCATCGTATTCCTTCAATGGTGAGCAATTGAAGAAGACATCCTCAGGGAATACCTATCAATTTCTTCATCACATGTCTGGTGGATCTCAAATCAGTGAGGATGGTGACATAGCTATGGATGGTGGGAACTCACACAATGGGATAAATTTTGCTGCAAGACTGCAACAGTTTCAGCAAATGCAGCACCAGCATCGTGTGCATTTGAAAACACAGGCACAGTCACGCAAAAATTCCTCCACATCATCAAAGGAGGCACAGAGACAGGAAGAACCAAAGCGACCTCAGTTGGGTGAGGTTATTGTTGTTGCTCCTTCAAGATCATCTAAAAGAGCCCAGGGTAGCTAG 2169 0.426 MADALSLIPAAVLRNLADKLYEKRKNAALDIEGIVKQLAAAGDHDKITAVINLLTTEFTYSPQANHRKGGLIGLAAATVGLTSEAAQHLEQIVPPVLNSFSDQDSRVRYYACEALYNIAKVVRGDFIIFFNQIFDALCKLSADSDANVQSAAHLLDRLVKDIVTESDQFSIEEFIPLLRERMNVLNPYVRQFLVGWITVLDSVPDIDMLGFLPDFLDGLFNMLSDSSHEIRQQADSALSEFLQEIKNSPSVDYGRMAEILVQRAGSPDEFTRLTAITWINEFVKLGGDQLVPYYADILGAILPCIADKEEKIRVVARETNEELRALKADPAEAFDVGAILSIARRQLSSEWEATRIEALHWISTLLNKYRTEVLQFLNDIFDTLLKALSDPSDEVVLLVLDVHACIAKDPQLFRQLVVFLVHNFRVDNSLLEKRGALIIRRLCVLLNAERVYRELSTILEGESDLDFASIMVQALNLILLTSSELSEIRDLLKQSLVNPVGKDLYVSLYASWCHSPMAIISLCLLAQTYQHASAVIQSLVEEDINVKFLVQLDKLIRLLETPIFAYLRLQLLEPGRYTWLFKALYGLLMLLPQQSAAFKILKTRLKAVPSYSFNGEQLKKTSSGNTYQFLHHMSGGSQISEDGDIAMDGGNSHNGINFAARLQQFQQMQHQHRVHLKTQAQSRKNSSTSSKEAQRQEEPKRPQLGEVIVVAPSRSSKRAQGS 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g00150 722 FunFam protein VAC14 homolog 126 248 - -
Pumo6g00150 722 MobiDBLite consensus disorder prediction 669 689 - -
Pumo6g00150 722 Gene3D - 247 420 IPR011989 -
Pumo6g00150 722 Gene3D - 1 246 IPR011989 -
Pumo6g00150 722 MobiDBLite consensus disorder prediction 669 722 - -
Pumo6g00150 722 FunFam ARM repeat superfamily protein 7 125 - -
Pumo6g00150 722 PANTHER TAX1 BINDING PROTEIN-RELATED 7 692 IPR026825 GO:0006661|GO:0070772
Pumo6g00150 722 Pfam Vacuolar protein 14 C-terminal Fig4p binding 429 608 IPR021841 -
Pumo6g00150 722 Pfam Vacuolar 14 Fab1-binding region 65 161 - -
Pumo6g00150 722 FunFam protein VAC14 homolog isoform X1 249 410 - -
Pumo6g00150 722 ProSiteProfiles HEAT repeat profile. 92 127 IPR021133 -
Pumo6g00150 722 SUPERFAMILY ARM repeat 3 545 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g00150 Pumo-Chr6 1770754 1780188 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g00150 6 1770754 1780188 Pumo6g00150 6 1770754 1780188 ECH