Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g00130 ATGTCGTCTAACACCGAACACAGACTAAGCTTGGACCCTGAGAAACAGGGCCTTCTCAACCACCACACCGAGAACCACTTCACCGCCGGCGAAATCGTCCGCGACATCATCATCGGCGTTTCCGACGGCCTCACCGTCCCCTTCGCCCTCGCCGCCGGCCTCTCCGGCGCCAATGCCACCTCCTCCATCGTTCTCACCGCCGGCATTGCCGAAGTCGCCGCCGGCGCCATCTCCATGGGCCTCGGCGGTTATTTGGCAGCAAAAAGTGAAGCCGATCATTACGCCAGAGAATTGAAAAGGGAACAAGAAGAAATCATCGCCGTGCCAGAAACTGAAGCGGCAGAGGTAGCAGAAATATTGGCTCAGTATGGAGTAGAGGCACATGAATATGCACCTGTGGTGAATGCTCTAAGAAAAAACCCTCAAGCATGGCTTGATTTCATGATGAAATTTGAGCTGGGACTAGAGAAGCCAGATCCAAGAAGAGCATTGCATAGTGCAATGACAATTGCCACTGCATACATAATGGGTGGGCTTGTTCCTCTCGTTCCTTACATGTTCATTCCAAAGGCAGCAGAGGCAGTTGTGTTATCAGTTGTGGTTACTTTGGTTGCATTGCTGATTTTTGGCTATGCCAAGGGACACTTCACGGGCAATAAACCTTTCAGGAGTGCTTTGGAAACGGCTCTAATTGGTGCCATCGCCTCTGCTGCTGCTTTTGGTATGGCAAAGGCTTTCAATCCATAG 747 0.5154 MSSNTEHRLSLDPEKQGLLNHHTENHFTAGEIVRDIIIGVSDGLTVPFALAAGLSGANATSSIVLTAGIAEVAAGAISMGLGGYLAAKSEADHYARELKREQEEIIAVPETEAAEVAEILAQYGVEAHEYAPVVNALRKNPQAWLDFMMKFELGLEKPDPRRALHSAMTIATAYIMGGLVPLVPYMFIPKAAEAVVLSVVVTLVALLIFGYAKGHFTGNKPFRSALETALIGAIASAAAFGMAKAFNP 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g00130 248 Coils Coil 84 104 - -
Pumo6g00130 248 Pfam VIT family 33 243 IPR008217 GO:0005384|GO:0030026
Pumo6g00130 248 CDD CCC1 12 246 - -
Pumo6g00130 248 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 17 246 IPR008217 GO:0005384|GO:0030026
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo6g00130 Pumo-Chr6 1496562 1498902 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo6g00130 1 244 Nodulin-like Gene Family AT3G43660 24.898 9.71e-11 57.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g00130 6 1496562 1498902 Pumo6g00130 6 1496562 1498902 ECH