Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo6g00115 ATGTCTCTTCCACCCATAGAGTGTGTATACGTAACAGAAGAGTGTGTTCGTGAATGGAGGAGCGGCAACCCCGCCCTCAAGGTTTCCCAACCTGTTCCAATGCTTCGCTTTCTCTACGAGCTCTGCTCGACTATGGTTCGGGGTGAATTGCCCTTTCAGAAGTGTAAAGTAGCATTAGATTCTGTCATATTTTCAGATAAAGGTTCCAATGAGAAAATAGCTTCAAATTTTGCTGATATAGTGACCCAGATGGCTCAAGATCATACAATGTCAGGAGAGTTCCGTTCTCGTCTCATCAAACTGGCAAGATGGCTTGTGGAATCTGAAATGGTTCCAGTTAGGCTACTTCAAGAACGTTGTGAGGAAGAATTTTTGGGGGAGGCGGAGTTGATCAAAATTAAGGCTCAGGAGTTGAAGGGTAAAGAGGTCAGAGTTAATACCCGACTTCTCTATCAGCAAACCAAATTCAACCTTCTCAGAGAAGAGAGTGAGGGCTATGCAAAGCTGGTTACTCTTCTTTGTCGGGACTCTGATGCACCTACTCAAAAATCATCTGCAGCAACAATTGGCATTATTAAGTCCTTAATTGGCCATTTTGATTTGGATCCAAATCGTGTTTTCGATATTGTTCTTGAGTGTTTTGAACTGCAGCCTGATGATGACGTGTTTATAGAGTTGATTCCTATTTTTCCAAAGTCTCATGCTTCACAGATTCTTGGATTTAAGTTTCAATATTATCAACGCATGGAAGTCAACAGTCCTGTTCCATTTGGGCTCTATAGACTTACAGCCTTGCTGGTGAAGCAAGATTTTATTGATCTTGCTAGCATATATGCTCATCTACTTCCCAGGGATGATGAGGCATTTGAGCATTACAATACTTTCTCTTCCAAGCGCCTTGATGAGGCTAATAAAATTGGAAAAATAAACCTTGCTGCAACTGGAAAAGATCTAATGGATGATGAGAAACAGGGGGATGTCACTATAGATCTCTTTGCTGCTATAGACATGGAAACAGATGCGATTGAAGAGCGAACAACTGAGCTTCAGAGCAGTCAGACTTTGGGCTTGCTTACTGGCTTTCTTTCAGTGGATGACTGGTATCATGCACATATACTATTTGAACGCCTTTCACCACTCAATGCAGTGGAACATATTCAAATATGTGACAGTTTGTTTAGGCTTATCAAGAAGTCAATTTGTTCAGCATATGATGTTATTCGTCAGACGCATCAAAATCCTGGATCGTCCACAGGAGGCAGCACTGATGCTATGGATGTAGATAATTCTTCAGGATACGGTTCTTTCATAGATCTTCCAAAGGAACTTTTTCAGATGCTTGCTTGTACTGGACCTTATCTCTACCGTGATACTGTACTGTTGCAGAAGGTTTGTAGGGTGTTGAGAGGTTATTACCTTTCTGCTCTTGAGCTTGTAAGTCATGGCAATGGTGCCTTGAATCCTCTGTTACAAGTTCCTGGAAATCCTCACCTACATCTTAAGGAGGCAAGGCTAAGGGTGGAGGATGCTTTAGGAGCATGTCTACTACCTTCTCTGCAGTTAATTCCTGCCAATCCAGCTGTTGGCCAGGAAATTTGGGAACTGATGAGTCTCCTTCCTTATGAGGTGCGATATCGTTTGTATGGTGAATGGGAGAAAGATGATGAGCGCATTCCTATGCTCTTAGCTGCAAGACAAACTGCCAAGTTGGACACTAGACGTATTTTGAAACGGCTGGCAAAGGAAAATTTGAAGCAGCTGGGTCGGATGGTTGCAAAATTAGCTCATGCCAACCCTATGACTGTCCTTCGAACAATTGTTCATCAGATTGAGGCTTATAGAGACATGATTACTCCTGTAGTGGATGCATTTAAGTACTTAACTCAGCTTGAGTATGATATATTGGAATATGTTGTGATTGAGCGCTTGGCGCATGGCGGACGTGATAAGTTAAAGGATGATGGCCTTAATTTGTCAGATTGGCTTCAATCTCTAGCTTCATTTTGGGGCCACCTGTGTAAGAAGTACCCGTCAATGGAATTACGGGGCCTTTTCCAGTATCTTGTAAATCAGTTAAAAAAGGGGCAGGGAATTGAGCTTGTTCTACTGCAGGAGCTTATTCAACAAATGGCAAATGTCCAGTACACGGAGAACTTGACTGAGGAACAATTGGATGCAATGGCAGGGAGTGAGACTCTCAGATATCAAGCAACATCTTTTGGTGTAACTCGGAATAATAAGGCATTGATAAAGTCAACTAGCAGACTTCGAGATGCATTACTTCCAAAAGATGAACCGAAGTTGGCGATCCCCCTGTTACTGCTTATTGCTCAACACCGATCTCTGGTTGTCATCAATGCAGATGCACCCTACATTAAGATGGTTAGCGAGCAGTTCGATAGATGTCACGGAACTCTCCTTCAATATGTGGAATTTCTCTGTAGTGCAGTCACTCCAGCATCAAATTATGCCATTCTTATTCCCTCCCTCAATGACCTGGTCCACCTTTACCACCTGGACCCTGAGGTTGCTTTCTTGATATATCGCCCTGTAATGAGGCTTTTCAAGTCTCCGAGGAATCCTGATGTTTGCTGGCCCTTGGATGATAAAAATGCTGCAACTGATGCATCTACGAACTTTGAGTCTGATCATTCTGCTAGTATGGTTCTAAATCTTGGCTCTGCTCAAAATCCTATAAGTTGGTCGTATCTTCTTGATACTGTTAAAACCATGTTGCCTTCGAAAGCATGGAATAGCTTATCTCCTGATCTTTATGCTACGTTTTGGGGTCTTACATTATATGATCTGTATGTTCCAAAAAATCGTTATGAGTCAGAAATAGCCAAATTGCATGCTAATCTTAAATCCTTGGAGGAGCTTTCTGACAATTCAAGCTCAGCAATCACGAAGAGGAAGAAAGAAAAGGAAAGAATTCAAGAATCTCTTGATCGTCTGATCACTGAACTGCATAAACATGAAGAGAATGTTGCATCTGTTCGTAGACGGCTTTCTCATGAAAAAGACAAATGGTTAAGTTCCTGTCCTGACACCTTAAAGATCAACATGGAGTTTCTTCAGCGTTGTATATTTCCACGCTGTACTTTCAGTATGCCAGATGCTGTTTATTGTGCTATGTTTGTACACACACTTCATTCCCTTGGAACCCCCTTTTTTAACACAGTCAACCACATAGATGTTTTGATTTGTAAGACCCTACAACCAATGATATGCTGCTGCACTGAATACGAGGCAGGCAGGCTTGGCAGGTTTCTGTATGAGACTTTGAAGATTGCTTACTATTGGAAGAGTGATGAATCTATTTATGAACGTGAGTGTGGAAACATGCCAGGCTTTGCTGTTTATTATAGATATCCAAATAGCCAGCGAGTTACATATGGGCAGTTCATTAAGGTACACTGGAAATGGAGTCAAAGAATTACTCGTTTACTAATTCAGTGTCTGGAATCTACCGAGTACATGGAAATTAGAAATGCTCTTATAATGTTGACAAAAATTTCTAGTGTTTTCCCTGTTACTCGGAAGAGTGGGATCAACCTTGAAAAGCGGGTAGCTAAGATTAAAAGTGATGAAAGAGAGGATCTTAAGGTGTTGGCAACTGGTGTTGCAGCAGCATTGGCTGCTAGGAAGCCTTCTTGGGTTACCGATGAAGAATTTGGTATGGGTTATCTTGAGTTGAAACCTGCACCATCTGTGACTAAATCTTCAGCTGGAAACTCAGCAACTATACAAAGTGGGATAAATCTCAATGTTTTACAAAGTGAATCTGCCAGTGGAAAACATGTGGACTCTGGAAACACAGTCAAAGATCAGGCAATAAGAACAAAAACTGCAGATGGCAAGTCTGAGAGAACAGAAAGCGTTGCAGTGACAAAATCTGATTCTGGCCACATAAAACTCAAGAGTAGTTCAATGGTGAATGGATTGGATGCTCAATCATCCTTGGCCTCATCTTCTGTACAATCTGGGACGTCAAAATCTATGGAAAACCCAAAGCAAGTGGAAGAATCCATAAATAGAGCATCAGATGAACATGGGACAAGAACTGCTGAGTTAAGAACTTTGGCAAAACGTTCAGTGCCTGCTGGTTCACTGTCAAAGCCCTTAAAACAAGATCCTGTAAAAGAGGATGGTAGATCTGGAAAACCTGTTGCTAGAACTTCTGGTTCCTCGAGCAGTGACAAGGATCTACAAAACCATGCATCGGAGGGAAGACACGGTGGAACTAGCAATGTATCTTCTTCAGTCACTGCTAATGGTAACACCATTTCAGGTTCTACAAAAGGTTCAAATCCACCAGTAAAGATTTCATTGGATGGTCCTGGTAATGAATCAAAGGCAGAGGTTGGAGTTGCCAAGTCTTCTGATATTAGGGCTTCTATGGTGAAGGATGATGGAAATGATATTACCGACAGCACAAGAGGATCCTCTTCTCGCATAGTTCATTCCCCTAGGCATGAAAACACAGGAGTTACTTCAAAGTCTAATGATAAAGTTCAGAAGAGAGCTAGTTCTGCTGAAGAACCAGACAGACTAGGTAAACGACGGAAAGGGGATGTGGAGCTAAGAGATTTTGAAACTGAAGTTAGATTCACTGAAAGAGAGAAGCTGATGGATCCTCGATTTGCTGATGACAAATCGGGACCAGAGGAACATGGTCTGTACAGGGCAGGTGATAAGCCATTGGAAAGGACAAAAGACAAAGGTAATGAAAGATATGAAAGAGATCACAGGGAAAGAATGGACCGTCTGGATAAGTCTCGTGGTGATGAATTTGTTGCTGAAAAAACTAGGGATAGGTCAATTGAAAGATATGGAAGAGAACGATCTGTTGAGAGAATGCAAGAGAGGGGTAGTGAGAGGAGTTTTAATAGACTCCCTGAGAAAGCTAAGGATGAAAGAAACAAGGATGATAGAAATAAATTACGATACAATGATGCATCAGTAGAAAAATCTCATGCTGATGATCGCTTCCATGGGCAAAGCTTGCCTCCGCCACCCCCTTTACCCCCTAATATGGTTCCTCAATCTGTGGGAGCTGGTAGGCGCGATGAAGATGCTGATAGAAGGTATGGAGCTACAAGGCACTCTCAAAGACTTTCTCCAAGGCACGAGGAAAAAGAACGGAGACGGTCTGAAGAGACTGTGGTTTCTCAGGATGATGCCAAACGCCGAAAAGAAGATGATTTTCGAGATCGAAAACGTGAGGAAATTAAGGTGGAAGAGAGGGAGCGGGAAAGAGAGAAAGCAAACACTCTAAAGGAAGAGTTGGATTTAAATGCCGTATCCAAGAGACGTAAACTCAAGAGGGAGCATTTACCAACTGGTGAACCTGGCGAGTACTCACCAGTGGCCCCTCCACCTCCTCCCCCTGGTATTGGTATATCACTAGCGTATGATGGAAGGGACAGAGGAGACAGAAAGGGACCAATCATCCAGCATCCAAGTTACATAGATGAGCCAAGTCTCAGGATTCACGGTAAAGAGGTGGCTAGCAAGTTGAATCGCCGTGATTCCGATCCCGTGTATGAACGCGAATGGGAGGATGAGAAGAGACAAAGAGCTGATCAGAAGCGAAGGCACAGGAAGTAA 5610 0.4257 MSLPPIECVYVTEECVREWRSGNPALKVSQPVPMLRFLYELCSTMVRGELPFQKCKVALDSVIFSDKGSNEKIASNFADIVTQMAQDHTMSGEFRSRLIKLARWLVESEMVPVRLLQERCEEEFLGEAELIKIKAQELKGKEVRVNTRLLYQQTKFNLLREESEGYAKLVTLLCRDSDAPTQKSSAATIGIIKSLIGHFDLDPNRVFDIVLECFELQPDDDVFIELIPIFPKSHASQILGFKFQYYQRMEVNSPVPFGLYRLTALLVKQDFIDLASIYAHLLPRDDEAFEHYNTFSSKRLDEANKIGKINLAATGKDLMDDEKQGDVTIDLFAAIDMETDAIEERTTELQSSQTLGLLTGFLSVDDWYHAHILFERLSPLNAVEHIQICDSLFRLIKKSICSAYDVIRQTHQNPGSSTGGSTDAMDVDNSSGYGSFIDLPKELFQMLACTGPYLYRDTVLLQKVCRVLRGYYLSALELVSHGNGALNPLLQVPGNPHLHLKEARLRVEDALGACLLPSLQLIPANPAVGQEIWELMSLLPYEVRYRLYGEWEKDDERIPMLLAARQTAKLDTRRILKRLAKENLKQLGRMVAKLAHANPMTVLRTIVHQIEAYRDMITPVVDAFKYLTQLEYDILEYVVIERLAHGGRDKLKDDGLNLSDWLQSLASFWGHLCKKYPSMELRGLFQYLVNQLKKGQGIELVLLQELIQQMANVQYTENLTEEQLDAMAGSETLRYQATSFGVTRNNKALIKSTSRLRDALLPKDEPKLAIPLLLLIAQHRSLVVINADAPYIKMVSEQFDRCHGTLLQYVEFLCSAVTPASNYAILIPSLNDLVHLYHLDPEVAFLIYRPVMRLFKSPRNPDVCWPLDDKNAATDASTNFESDHSASMVLNLGSAQNPISWSYLLDTVKTMLPSKAWNSLSPDLYATFWGLTLYDLYVPKNRYESEIAKLHANLKSLEELSDNSSSAITKRKKEKERIQESLDRLITELHKHEENVASVRRRLSHEKDKWLSSCPDTLKINMEFLQRCIFPRCTFSMPDAVYCAMFVHTLHSLGTPFFNTVNHIDVLICKTLQPMICCCTEYEAGRLGRFLYETLKIAYYWKSDESIYERECGNMPGFAVYYRYPNSQRVTYGQFIKVHWKWSQRITRLLIQCLESTEYMEIRNALIMLTKISSVFPVTRKSGINLEKRVAKIKSDEREDLKVLATGVAAALAARKPSWVTDEEFGMGYLELKPAPSVTKSSAGNSATIQSGINLNVLQSESASGKHVDSGNTVKDQAIRTKTADGKSERTESVAVTKSDSGHIKLKSSSMVNGLDAQSSLASSSVQSGTSKSMENPKQVEESINRASDEHGTRTAELRTLAKRSVPAGSLSKPLKQDPVKEDGRSGKPVARTSGSSSSDKDLQNHASEGRHGGTSNVSSSVTANGNTISGSTKGSNPPVKISLDGPGNESKAEVGVAKSSDIRASMVKDDGNDITDSTRGSSSRIVHSPRHENTGVTSKSNDKVQKRASSAEEPDRLGKRRKGDVELRDFETEVRFTEREKLMDPRFADDKSGPEEHGLYRAGDKPLERTKDKGNERYERDHRERMDRLDKSRGDEFVAEKTRDRSIERYGRERSVERMQERGSERSFNRLPEKAKDERNKDDRNKLRYNDASVEKSHADDRFHGQSLPPPPPLPPNMVPQSVGAGRRDEDADRRYGATRHSQRLSPRHEEKERRRSEETVVSQDDAKRRKEDDFRDRKREEIKVEEREREREKANTLKEELDLNAVSKRRKLKREHLPTGEPGEYSPVAPPPPPPGIGISLAYDGRDRGDRKGPIIQHPSYIDEPSLRIHGKEVASKLNRRDSDPVYEREWEDEKRQRADQKRRHRK 1869
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo6g00115 1869 Coils Coil 968 1009 - -
Pumo6g00115 1869 Coils Coil 1737 1766 - -
Pumo6g00115 1869 PANTHER THO2 PROTEIN 7 1757 IPR040007 GO:0000347|GO:0006397|GO:0006406
Pumo6g00115 1869 MobiDBLite consensus disorder prediction 1316 1869 - -
Pumo6g00115 1869 MobiDBLite consensus disorder prediction 1477 1505 - -
Pumo6g00115 1869 Pfam Transcription- and export-related complex subunit 591 666 IPR021726 -
Pumo6g00115 1869 Pfam Transcription factor/nuclear export subunit protein 2 917 1211 IPR021418 -
Pumo6g00115 1869 MobiDBLite consensus disorder prediction 1281 1296 - -
Pumo6g00115 1869 MobiDBLite consensus disorder prediction 1342 1358 - -
Pumo6g00115 1869 Coils Coil 940 960 - -
Pumo6g00115 1869 MobiDBLite consensus disorder prediction 1316 1341 - -
Pumo6g00115 1869 MobiDBLite consensus disorder prediction 1687 1782 - -
Pumo6g00115 1869 Pfam THO complex subunit 2 N-terminus 439 589 IPR032302 -
Pumo6g00115 1869 Pfam THO complex subunit 2 N-terminus 36 413 IPR032302 -
Pumo6g00115 1869 MobiDBLite consensus disorder prediction 1786 1800 - -
Pumo6g00115 1869 MobiDBLite consensus disorder prediction 1281 1302 - -
Pumo6g00115 1869 MobiDBLite consensus disorder prediction 1506 1664 - -
Pumo6g00115 1869 MobiDBLite consensus disorder prediction 1390 1439 - -
Pumo6g00115 1869 MobiDBLite consensus disorder prediction 1827 1861 - -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g00115 6 1309447 1329173 Pumo6g00115 6 1309447 1329173 ECH