Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo1g00448 ATGAGAAGTTCAACATTGCTAGAGACTTCATGTGGATTCCTGTTACAGGAACTGCAGATAATATGGGATGAAGTTGGAGAAGATAAGTTCGAAAGGGAGAAGGTTCTGCTAGATTTAGAGCAAGAGTGCCTTGAGGTTTACAGAAGAAAAGTTGACAGAGCAAATATATCTAGAGCTCGTCTGCATCAGGAATTGGCCGAGGCTGAGGCTGAATTTACCCACCTTCTTTTGTCCCTTGGTGAACGATCTCTACCTGGCCGGCCGGAGAAAAGGGCAGGTTCACTAAAAGAGCAGCTAGATTCAATCACTCCAGCACTTCGGGAAATGCGCTTGAGGAAAGAAGAGAGGTTAAACCAATTCCGAACTGTGCAAGGTCAAATTCAAAAAATTTCTGCAGAAATTGCAGGTAACTCAGACAATGAACCCTCGACCATTGTAGTAAACGAGAATGACCTTTCACTAAAAAGACTTGAGGAGTATCAGAATGAGTTGCAAAGACTTTACAATGAGAAGAATGAAAGACTTCAGCAAGTGGAAAAATACATAGACATAATACACAGCTTGTCCACGATCTTGGGAAAGGATTCTTCAGCAATCATCATGGAAGTTCATCCAAGCTTAAATGATTTGTGTGGAATAACAAAAAACATAAGTGACACCATCTTAGATAAACTCAATATCACAGTGGAGACCCTTTTTGAAGAAAAGCAAAATCGGCTGGACAAGCTTCACCATTTAGGCAAAGCACTGTCAAATCTATGGAATCTTATGGACACACCATACAGTGAGCGACAATCTTTCTCCCATGTAATCAATTTGTTGTCACTCTCATCTGCAGAAGTAACAGATCCGGGAAGTCTTACTCTAGAAATAGTCCAGCAGACTGAAGCTGAAGTAAAGAGACTGGATCAACTAAAAGCAAGCAAGATGAAGGAGCTATTCCAGAAGAAGCGGGAGGAACTGGAGTTGATATGCAAGAAATCACATGTGGAGATTCCTTCAAGGGAAGAGATGAACAATATAATTAACCTCATAAACTCAGGGGAGATTGACCATTCCGATCTCCTCCTGAGCATGGATGAACAGATATCAAGAGCAAAAGAAGAGGCTTCTAGCAGGAAGGCTATCATGGAGAAAGTGGAGAAGTGGATGTTGGCACGTGATGAGGAGCGCTGGCTAGAAGAATATAGCAGGGATGAGAATCGATACTCAGTCAGTAGAGGAGCTCACAAAAACTTGAGACGTGCTGAACGTGCCCGTATAATGGTCAGCAGAATGCCAGCTTTGGTAGATTTGCTAATAAAAATGACTAGGAGTTGGGAAGAAGAAAGAAACAAAGTTTTCTTGTATGATCAGGTACCTCTAATGGCCATATTGGAAGAATATAACATACTAAGGCGAGAAAAGGAGGAGGATACGAAAAGACAGCAGCCGTGGGAAAAAAAGAGGATACAAAGCCAAGTAGTTGAGCGAGATAATACTTATGTGTCAAGACCCGGCACCAGCAGCAGGCGTCTTCCAAGTAGAAGCTTGAATGGAGCTCTAGACAGTTCTGTGGTCCTGAACAGAAGGCTTTCTATGGGAATCCAACAGCTGGGATCCAACAGCATAAATTCGGGAAATCACGGCATGTCCTACATTAAGGATGGAAGGAATGTCCTAAGAAAAAAGATTTTTGGCGAACCCACCTTCACTTCTCATACAAGAGATGAGGCATCTTCTGCGGTGTCAACACATTCTATACCATTTTCCCCTTAA 1758 0.4238 MRSSTLLETSCGFLLQELQIIWDEVGEDKFEREKVLLDLEQECLEVYRRKVDRANISRARLHQELAEAEAEFTHLLLSLGERSLPGRPEKRAGSLKEQLDSITPALREMRLRKEERLNQFRTVQGQIQKISAEIAGNSDNEPSTIVVNENDLSLKRLEEYQNELQRLYNEKNERLQQVEKYIDIIHSLSTILGKDSSAIIMEVHPSLNDLCGITKNISDTILDKLNITVETLFEEKQNRLDKLHHLGKALSNLWNLMDTPYSERQSFSHVINLLSLSSAEVTDPGSLTLEIVQQTEAEVKRLDQLKASKMKELFQKKREELELICKKSHVEIPSREEMNNIINLINSGEIDHSDLLLSMDEQISRAKEEASSRKAIMEKVEKWMLARDEERWLEEYSRDENRYSVSRGAHKNLRRAERARIMVSRMPALVDLLIKMTRSWEEERNKVFLYDQVPLMAILEEYNILRREKEEDTKRQQPWEKKRIQSQVVERDNTYVSRPGTSSRRLPSRSLNGALDSSVVLNRRLSMGIQQLGSNSINSGNHGMSYIKDGRNVLRKKIFGEPTFTSHTRDEASSAVSTHSIPFSP 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo1g00448 585 Coils Coil 292 312 - -
Pumo1g00448 585 Coils Coil 44 71 - -
Pumo1g00448 585 MobiDBLite consensus disorder prediction 566 585 - -
Pumo1g00448 585 PANTHER PROTEIN REGULATOR OF CYTOKINESIS 1 PRC1-RELATED 7 549 IPR007145 GO:0000226|GO:0008017
Pumo1g00448 585 MobiDBLite consensus disorder prediction 491 510 - -
Pumo1g00448 585 MobiDBLite consensus disorder prediction 565 585 - -
Pumo1g00448 585 Gene3D - 363 497 - -
Pumo1g00448 585 Coils Coil 150 181 - -
Pumo1g00448 585 Pfam Microtubule associated protein (MAP65/ASE1 family) 14 510 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo1g00448 Pumo-Chr1 6142810 6147449 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo1g00448 3 506 EF-hand Containing Proteins AT5G62250 39.689 5.43e-98 307
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo1g00448 1 6142810 6147449 Pumo1g00448 1 6142810 6147449 ECH