Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g00633 ATGCCGGACTGCGCCGCCTGCGTAGCTCGCTCTGTGAGTCAAATCGGTAACTTGTGCTCACAGACATGCGGGGGATCACTGCAGCTTGAAGGTTGCTATGTCAAGTACGACAATTCAAGCTTTCTGGGTGTGGAAGACAAGACAGTGGTGTTGAAGAAATGTGGACCGTCGATTGGGTACAATGAGGACACAATGAAGGGTCGAGATGCTGTCTTGAATGGTTTGGTGGGGTCAAGTGGGCCATATAGGGTGGGTGGATCCGGAAACATACAAGGTATGACCCAGTGTACTGGAGATCTCAGTTATGGTGAATGTGAGGATTGTGTTTCTGAGGCAATCAAACGTTTGCAAAGTGAGTGTGGGAGTGCTGACTATGGCGATATGTTCTTGGCCAAGTGTTATGCAAGGTACTCTACTGGTGGATCCCATGATTTCTCAAAGGGTCACAGCGGAAAATCAAATAACCGTGGAGAAAAGATATTTGCAATCATCATCGGATTACTAGCTGGAGTTGCTATTCTAATTATATTCCTCGCATTCATAGGGAGAATTTGTCAAGGACAAGGTAAATAA 573 0.4625 MPDCAACVARSVSQIGNLCSQTCGGSLQLEGCYVKYDNSSFLGVEDKTVVLKKCGPSIGYNEDTMKGRDAVLNGLVGSSGPYRVGGSGNIQGMTQCTGDLSYGECEDCVSEAIKRLQSECGSADYGDMFLAKCYARYSTGGSHDFSKGHSGKSNNRGEKIFAIIIGLLAGVAILIIFLAFIGRICQGQGK* 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g00633 190 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 2 184 - -
Pte8g00633 190 FunFam Cysteine-rich repeat secretory protein 60 62 140 - -
Pte8g00633 190 ProSiteProfiles Gnk2-homologous domain profile. 1 41 IPR002902 -
Pte8g00633 190 Pfam Salt stress response/antifungal 87 139 IPR002902 -
Pte8g00633 190 Gene3D - 67 140 IPR038408 -
Pte8g00633 190 Gene3D - 1 41 IPR038408 -
Pte8g00633 190 ProSiteProfiles Gnk2-homologous domain profile. 42 142 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g00633 Pte-Chr8 28989314 28991394 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte8g00633 3 188 Receptor kinase-like Gene Family AT1G70530 26.341 3.47e-10 56.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte8g00633 8 28989314 28991394 Pte8g00633 8 28989314 28991394 RCT