Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte2g00031 ATGGACTCTAATTCCACCATTCTCATGGTCCTGGCCCTAACTTCTAGCTTTTACATGCTTGCCTCTGCCGGTAATTTCTACCAAGATTTTGAGATAGCATGGGGAGAAGGTCGAGCTAAGATACTTAATAATGGCGAGCTTCTCACGCTTTCTCTCGACAAATCTTCTGGTTCTGGCTACCACTCAAAGAATGAGTATCTCTTTGGGAAGGTTGACATGCAGATAGAGCTTGTACCTGGAAACTCAGCTGGCACCGTCACTGCCTATTATATGTCCTCTAGAGGCTCAACATGGGATGAAATCGATTTTGAGTTCTTGGGGAATATGAGCGGCGACCCTTATATTGTTCACACAAATGTGTACAGCCAAGGAAAGGGTAACAGAGAGCAACAGTTCTATCTCTGGTTTGACCCAACTGCAGACTTTCACACATACTCTTTCCTTTGGAATCCTCAAACCATTATATTCTTTGTTGATGGCATCCCCATTAGAGAATTCAAGAATCTTGAAACCATAGGTGTTCCATTCCCAAAGAACCAACCCATGAGAATATACTCTAGCCTATGGAGTGCGGATGATTGGGCGACAAGGGGGGGTCTGGTCAAGACAGATTGGAGCCAAGCTCCATTCAAAGCTTCATATAGGAAGTTCAATGCCAATGCCTGTGTATGGTCTTTAGGAGCATCATCTTGCGGACAACGATCTGGATGGCTATCAGAGAAGTTGGATGCAACAAGTCGAGAGTGGTTGCAGTGGGTGCAAAAGAACTACATGATCTACAATTATTGCACCGATGCCAAAAGATTTCCGCAAGGCTTTCCTCCTGAATGCAACATGTCGTCATAG 846 0.4468 MDSNSTILMVLALTSSFYMLASAGNFYQDFEIAWGEGRAKILNNGELLTLSLDKSSGSGYHSKNEYLFGKVDMQIELVPGNSAGTVTAYYMSSRGSTWDEIDFEFLGNMSGDPYIVHTNVYSQGKGNREQQFYLWFDPTADFHTYSFLWNPQTIIFFVDGIPIREFKNLETIGVPFPKNQPMRIYSSLWSADDWATRGGLVKTDWSQAPFKASYRKFNANACVWSLGASSCGQRSGWLSEKLDATSREWLQWVQKNYMIYNYCTDAKRFPQGFPPECNMSS* 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte2g00031 281 FunFam Xyloglucan endotransglucosylase/hydrolase 13 279 - -
Pte2g00031 281 Pfam Xyloglucan endo-transglycosylase (XET) C-terminus 234 277 IPR010713 GO:0005618|GO:0016762|GO:0044042|GO:0048046
Pte2g00031 281 CDD GH16_XET 21 277 IPR016455 GO:0010411|GO:0016762|GO:0042546
Pte2g00031 281 ProSiteProfiles Glycosyl hydrolases family 16 (GH16) domain profile. 20 214 IPR000757 GO:0004553|GO:0005975
Pte2g00031 281 ProSitePatterns Glycosyl hydrolases family 16 active sites. 100 110 IPR008263 GO:0004553|GO:0005975
Pte2g00031 281 Pfam Glycosyl hydrolases family 16 27 206 IPR000757 GO:0004553|GO:0005975
Pte2g00031 281 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED 23 277 IPR044791 GO:0004553
Pte2g00031 281 Gene3D - 13 281 - -
Pte2g00031 281 SUPERFAMILY Concanavalin A-like lectins/glucanases 26 279 IPR013320 -
Pte2g00031 281 PIRSF EndGlu_transf 1 281 IPR016455 GO:0010411|GO:0016762|GO:0042546
Pte2g00031 281 PRINTS Glycosyl hydrolase family 16 signature 116 129 IPR008264 GO:0004553|GO:0005975
Pte2g00031 281 PRINTS Glycosyl hydrolase family 16 signature 134 151 IPR008264 GO:0004553|GO:0005975
Pte2g00031 281 PRINTS Glycosyl hydrolase family 16 signature 58 76 IPR008264 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte2g00031 Pte-Chr2 250220 251255 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte2g00031 1 277 Glycoside Hydrolase AT4G25810 71.025 7.36e-151 421
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte2g00031 2 250220 251255 Pte2g00031 2 250220 251255 RCT