Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte18g01200 ATGGGAGAGTTTTGTTTCCTCTTCTCATCGCAATCTCTTCCTTTCGTCCTTTTGCTGACACTTCTCTGCATACTACTACTACTACTACTACTAATAATGATAATATGTCAATTCCGGCGACTCCAAAAATTTTCCGGCAGTGGACCGCCAACCTATCCTTTTATTGGATGCCTAATATCCTTCTACAAAAATCAGAACCGGCTTTTGGATTGGTACACAGAACTTTTGGCCAAGTCCAATACCAATACGATTATTGTGCAGAGGCTAGGTGCAAATAGAACCATCGTGACAGCCAACCCAAAAAATGTTGAGTACATACTCAAAACTAACTTCAGCAACTTCCCTAAGGGCAAGCCCTTCACTGAAATCCTTGGTGACTTTCTTGGCAATGGCATATTCAATGTGGATGGCGAACTTTGGCGTAGTCAACGCAAGCTTGCAAGCCACGAGTTCAGTGCCAAGTCCTTGAAGCAATTTGTTTTGAGTACTTTGGAGGAAGAAGTGAAGAACAAACTCTTGCCACTGCTTGAGTCATTTTCAGTGGAGAACAAAGTGGTGGATTTGCAACAGTTGCTGAAAAGGCTATCATTCAACGTCATCTGTAAGGTCACGTTAGGAATGGATAGATGTTCGTTGGATCCATCAGAATCTACTTCACCTCTGACTAAAGCCTTTGAGATTGCTTCTGCGATATCAGCAAGACGTGGGGCAGCACCTCTGTTCTTGATTTGGAAGATCAAGAGATGGCTTGGAGTTGGATCAGAGAAAAGGCTTAGAGAAGCTGTGAAAGAAGTACATTCACATCTCATGGAGATAATACATGAGAGGAAGATGGAGATATACGAGAGACGAGAAAGTGGAGATGGCCTGAGATGTGACGATCTTCTATCACGGCTTTTACTTGCTGGCCATGACGAAGTGGTCATAAGAGACATGTTGATAAGTTTCATCATGGCAGGGAGGGACACGACATCAGCAGCTATGACATGGCTCTTCTGGTTGCTTTCTAATGATCCAGACATGGAGCAGCAAGTTGTAAAAGAGTCAGAACTTAAATCAGCTGAAACACTGTTCGATTACGAATCACTAAAGGATCTGGCTTTGTTAAAGTCGTGTCTTTTCGAGTCCATGAGGTTATTCCCACCTGTAGCTTGGGATTCCAAGCATGCCTTAGCAGATGACATATTACCAGATGGTACTCACATCAAGGCAGGAGATAGAGTCACTTATTTCCCTTACGGTATGGGCAGGATGGAAGCAATCTGGGGTAGTGACAGGCTTAAATTTAAGCCTGATCGATGGTTTGTAGATGGGGACAGGGAAAGAGGAGACATGGAGAAGGTCTGTTCTTACAAGTTTCCAGTATTTCAGGCTGGTCCTAGAATGTGTCTGGGGAAAGATATGGCTTTCATACAGATGATGTACGTTGTAGCATCCATAGTAGAACGTTTCAGAATCAAACCCATCAGATCAGACAAGCCAATTTTTGTGCCACTCCTGACGGCGCACATGGCCGGCGGCCTAGAAGTTCTCGTTTACAAGAGAAAGTGA 1551 0.4384 MGEFCFLFSSQSLPFVLLLTLLCILLLLLLLIMIICQFRRLQKFSGSGPPTYPFIGCLISFYKNQNRLLDWYTELLAKSNTNTIIVQRLGANRTIVTANPKNVEYILKTNFSNFPKGKPFTEILGDFLGNGIFNVDGELWRSQRKLASHEFSAKSLKQFVLSTLEEEVKNKLLPLLESFSVENKVVDLQQLLKRLSFNVICKVTLGMDRCSLDPSESTSPLTKAFEIASAISARRGAAPLFLIWKIKRWLGVGSEKRLREAVKEVHSHLMEIIHERKMEIYERRESGDGLRCDDLLSRLLLAGHDEVVIRDMLISFIMAGRDTTSAAMTWLFWLLSNDPDMEQQVVKESELKSAETLFDYESLKDLALLKSCLFESMRLFPPVAWDSKHALADDILPDGTHIKAGDRVTYFPYGMGRMEAIWGSDRLKFKPDRWFVDGDRERGDMEKVCSYKFPVFQAGPRMCLGKDMAFIQMMYVVASIVERFRIKPIRSDKPIFVPLLTAHMAGGLEVLVYKRK* 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte18g01200 516 PRINTS P450 superfamily signature 319 336 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte18g01200 516 PRINTS P450 superfamily signature 463 474 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte18g01200 516 PRINTS P450 superfamily signature 454 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte18g01200 516 PRINTS P450 superfamily signature 371 382 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte18g01200 516 Pfam Cytochrome P450 48 494 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte18g01200 516 SUPERFAMILY Cytochrome P450 47 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte18g01200 516 PANTHER CYTOCHROME P450 33 509 - -
Pte18g01200 516 CDD CYP86A 83 508 - -
Pte18g01200 516 Gene3D Cytochrome P450 32 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte18g01200 516 PRINTS E-class P450 group IV signature 400 414 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte18g01200 516 PRINTS E-class P450 group IV signature 310 336 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte18g01200 516 PRINTS E-class P450 group IV signature 366 382 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte18g01200 516 PRINTS E-class P450 group IV signature 463 481 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pte18g01200 516 PRINTS E-class P450 group IV signature 417 435 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte18g01200 Pte-Chr18 24273859 24275554 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte18g01200 46 515 Cytochrome P450 AT3G01900 58.351 0.0 572
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte18g01200 18 24273859 24275554 Pte18g01200 18 24273859 24275554 RCT
Pte18g01200 18 24273859 24275554 Pte15g00831 15 6058653 6060267 RCT
Pte14g00502 14 24443545 24444705 Pte18g01200 18 24273859 24275554 RCT
Pte12g00897 12 12077639 12079578 Pte18g01200 18 24273859 24275554 RCT