Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte14g00523 ATGTTTGAAGAGAAAGATCTCTCTAGTGTTCTAGCTTCTGAGGCAGAGGGACAGAACTCTCACTGCCAAAGCAAGATGTCAGTTCAGCAAGTTTCTGAGAAACATATGGGGAACCCAGATTACAAAGCGGATTTTTTTGATAAGGGTATTGATTTTCTCAAGGAAACAATAAAGGTAAGTGGTGATGGGTTTCAATCGAAATCCTCGAAGGTGCGGAATTCTAGTTCTCAAGAGCTTCTTATCCGTCCTGATGATCCAAAGCTCCCTGGTTTTCTAGAGAAAGAGTTGTCTGGTAAACATTTGTTTAATTCTTTTGAAAAAATGAGTTACAAAGGGAAAGAAGTTATTGTTTCTGAGAATACAAATCCAGATGACCAGTGGGTGGAGAGAGATTTTCTCAGTTTGAGTGGTGGTAAAGGGAATTCATCAAAGAGAGCAGTTGAAGAAGAAGATCAAGAGGTTGAGAAGTATAAAGATAAGGAAAAGAAACCAAAGTTAGAAACTTTGAATCTCTCTCTTTGTCTACCTGATGTGTCTCTTTCTCTCACTGCTTCAAATATTTTGCAACATATTGGCGATCCTCCTCCTCCTGTGAAACCAAAGCCTAGCATGAGTATACAATCTCTTGTGCCGTCAACAAATAACACTCATACTACTTGTTCTAATGATTTCACTGCAGCTTCTTTGTCATATTCTTATTCTCATCAATTTTCGCACAACCCCAGTTGCTCTCTGACGCGTAATTCCACTGAAAATTTTGACTATTCCATTAGTAAAGACGATCCGATTTGGAATTGTGGAGAGGGGACTAATGGTTCCGTCCATAGTAGGTTTAAGCCAATTGGTGATGGGGCTAATTTGTCTAATCACGGGGGTGGGGGTCTTTTCTCAATGATGCAGAGCAGTGTTCATTGCAAAACTACTACAAGTTCTGATAACCATTCATTTTTCCCATCAGAATTACCTGCTAGGCCCAGGATTGAGACGCAGTCAGTAGATACAAAAGACAGGCACTCTGAGAATTTGAGAGTGATAGAGTGTGTTGATGTTGACAAGGTGAAGAAGATATCTAGACCAGATAGAATTCTGAGAGAGATTATATCGAAGTCTATACCTACCATGTCTCAGTTCATTCAGGAGCTACCTGTAGAGGTATTGATATCAGTTAAGGAGTATCTGAAGGATACCATAGAAACACCTGAGAAAAAGGATGAAATGTTGAACCTTCAAAAAAGTCTCGAGCGCAGATCTGATTTTACCAAAGAGGCTCTTTTGAAATGTCATCGAGAGGGATTGGAAATTCTAGTTTCTATCAAGATGGGGCTTGCAAGCTATTTGTCTGGAAAAGTTCAAGTTTCCAATGCAGATCTGTCTGAAGTTTTCTTGTTTATGAGATGTAGAAATGTCAGCTGCAAGAGCGTCTTGCCTTTTGATGATTGTGACTGCAAGATTTGCTCATCAAATAGGGGCTTTTGCAGTTCCTGCATGTGTCCTGTGTGTTTGAACTTTGATTGTGCAAATAATACATGCAGTTGGGTTGGTTGTGATGTCTGTTCCCATTGGTGCCATGCTGCATGTGGTATCCACAAGAATCTGATTAGACCTGGACCTAGCTTGAAGGGTCCAGCTGGAACCAGCGAGATGCAGTTTCATTGCATTGGGTGCGGACATGCTTCAGAAATGTTTGGTTTTGTTAAGGATGTGTTTTTGTTTTGTGCAAAGGATTGGGGTCAGGAAGCTTTGATGAAAGAACTTGAATGTGTTAGAAGGATATTCAAGGGAAGTGAAGACTTCAAGGGCAAGGAATTGCATAATACAGCTGACGATATTTTGTTTAAGCTTCAAACTAAGATGACATCTCCTTCGGATGCTTGCAACCTCATCATACAGTTTTTCAACTATGCAGGTAGCACATCAACATTTAGTGATTCTGGACTGCCATCCAAGGAGTTGGCGCCAACTCAATCCAACCTTGGAAAGGAGGTTGTTACACTAGCACGAGCTAGTTATCTGTCACCTAATAGAGCTCATTGTGACTTCAGTTATCCAAGGTCACAATGTGATTCCCAGTCAAAAGACTTGAGAAGCACCATCTTAAGTGATGTCAAGTCCAGAGATGAATTCCGGGTAGTAAGTTCACTACAGAAAAGTGGGTTTGATAGCTTGGAAACCATTGTAAAGATCAAGGAGGCCGAGGCAAGAATGTTTGAAGAGAAGGCAGAAGAAGCTAGACGAGCTGCAGAAGGGTTCAAAAAGATGATCAAAACAAAGATGGACAAACTGGAAGAAGAGTATGTTCAAAAGCTTGGTAAGCTATGCTTGCAGGAGATTGAGGATAAGAGAAGAAAGAAGTTGGAAGAGCTGAAGGGGTTGGAAAACTCTCACTGTGATTACTACAAAATGAAAATAAGAATGCAAGCTGAGATTGCCAGTCTCTTGGAAAGAATGGAAGCAACAAAGCAAAAGTGGGTGTGA 2475 0.4069 MFEEKDLSSVLASEAEGQNSHCQSKMSVQQVSEKHMGNPDYKADFFDKGIDFLKETIKVSGDGFQSKSSKVRNSSSQELLIRPDDPKLPGFLEKELSGKHLFNSFEKMSYKGKEVIVSENTNPDDQWVERDFLSLSGGKGNSSKRAVEEEDQEVEKYKDKEKKPKLETLNLSLCLPDVSLSLTASNILQHIGDPPPPVKPKPSMSIQSLVPSTNNTHTTCSNDFTAASLSYSYSHQFSHNPSCSLTRNSTENFDYSISKDDPIWNCGEGTNGSVHSRFKPIGDGANLSNHGGGGLFSMMQSSVHCKTTTSSDNHSFFPSELPARPRIETQSVDTKDRHSENLRVIECVDVDKVKKISRPDRILREIISKSIPTMSQFIQELPVEVLISVKEYLKDTIETPEKKDEMLNLQKSLERRSDFTKEALLKCHREGLEILVSIKMGLASYLSGKVQVSNADLSEVFLFMRCRNVSCKSVLPFDDCDCKICSSNRGFCSSCMCPVCLNFDCANNTCSWVGCDVCSHWCHAACGIHKNLIRPGPSLKGPAGTSEMQFHCIGCGHASEMFGFVKDVFLFCAKDWGQEALMKELECVRRIFKGSEDFKGKELHNTADDILFKLQTKMTSPSDACNLIIQFFNYAGSTSTFSDSGLPSKELAPTQSNLGKEVVTLARASYLSPNRAHCDFSYPRSQCDSQSKDLRSTILSDVKSRDEFRVVSSLQKSGFDSLETIVKIKEAEARMFEEKAEEARRAAEGFKKMIKTKMDKLEEEYVQKLGKLCLQEIEDKRRKKLEELKGLENSHCDYYKMKIRMQAEIASLLERMEATKQKWV* 825
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte14g00523 824 CDD PHD_OBE1_like 496 555 IPR047578 -
Pte14g00523 824 PANTHER VERNALIZATION-INSENSITIVE PROTEIN 3 99 823 IPR004082 -
Pte14g00523 824 MobiDBLite consensus disorder prediction 1 34 - -
Pte14g00523 824 Pfam Coiled-coil region of Oberon 685 813 IPR032535 -
Pte14g00523 824 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 503 523 IPR004082 -
Pte14g00523 824 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 416 431 IPR004082 -
Pte14g00523 824 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 576 595 IPR004082 -
Pte14g00523 824 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 720 740 IPR004082 -
Pte14g00523 824 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 759 781 IPR004082 -
Pte14g00523 824 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 377 399 IPR004082 -
Pte14g00523 824 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 457 478 IPR004082 -
Pte14g00523 824 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 431 446 IPR004082 -
Pte14g00523 824 MobiDBLite consensus disorder prediction 62 80 - -
Pte14g00523 824 Coils Coil 726 753 - -
Pte14g00523 824 MobiDBLite consensus disorder prediction 12 34 - -
Pte14g00523 824 MobiDBLite consensus disorder prediction 134 159 - -
Pte14g00523 824 Coils Coil 802 822 - -
Pte14g00523 824 Pfam PHD - plant homeodomain finger protein 466 590 IPR032881 -
Pte14g00523 824 Coils Coil 774 794 - -
Pte14g00523 824 MobiDBLite consensus disorder prediction 143 159 - -
Pte14g00523 824 MobiDBLite consensus disorder prediction 62 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte14g00523 Pte-Chr14 25010199 25014889 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte14g00523 466 615 PHD Gene Family AT5G57380 23.841 4.69e-08 54.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte14g00523 14 25010199 25014889 Pte14g00523 14 25010199 25014889 RCT