Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte14g00513 ATGGTGAAATCTACTGGTGAAAATGGGTCCGCGTCGGTGGCACCGTTTCTGAAGAAATGTTATGAAATGGTGGATGATGAGTCTACGCACCCCGTGATATCTTGGGGAAAGAATAATGACAGTTTTGTTATTTGGGACATGACTGAATTCTCTGTGCGTTTGCTTCCAAAGTATTTCAAGCACAGCAACGTCTCCAGCTTTATCAGACAACTCAATATCTATGGTTTTAGGAAGATTGATACAGACTGCTGGGAATTTGCAAATGAAGGATTCATCAAGGGTCAAAAGCATCTCTTGAAAACTATCTATAGAAGGAAAAACACTCAGACTGCTGATCACCAAAAAGTACTGCAGCAGAAGGACAAGTCAGATGAACCTTCTGGACTCGTCGATGCACTGTGGAAGGAAATTGAGAACCTCAAGACTGACAAATATGCCCTTTCGCAGGAATTGGTCAAACTTAGGCAAAACCAGGAATCTGCAGAGAATAAGTTGCTTTTGTTGAAGGATCGCATCAAGGGAATGGAAAAAAATGAGCAGCAGATGTTGTCATTCTTAGTTACGGTGATGCAAAATCCCAGCTTGCTGCTTCAATTTCTTCAGCCGAAAGACGATGATTGGCTCATGGATGAGCCTAGCAATATGTTAGAACCTGTTTATGCTTCTAATGGCATGATAGTAAGGTATAAACCTCCTCTTGGTGGATCAGCAGAACCTGAATATGCTCCAGCCCCAAATCCAATAACCAAGCCAGTCTCTGGTCCATTCTCAGAAGATTTAAAAGAATTCTTTATCAGTTCTGATTTTTTGAAGGTGCTTATTGATGAGCAAATATGTCCCTCGGAAAACCATTCTCCGTTTGTTCTGTCAGATGCAGCTGATGATAATTCATGGGAGCAGCTCTTGCGTAATCCTGCACTAGAAAATATCGAAGATTCAGAGCTGGAGACTGAAGAACCAATTGAAAGTGGAGTTGGGATGCCCTCCTCCTATGTATCTAATGCTTCCATTGAGAATTCTCAAAATTTTGACATGCTGGTTGCTGAGATGGAAAAAGCTCATTACCAGGAAACACAACGACTAGCTGTTGAGGAGGATATCATAGAGAATGATCAAAACTTGGAAAATCTGACAGAGCAGATGGGACTTCTGGCATCTGATCCTAAACACAAAAGGAAACTAGGGCGGGATGCTCATTAA 1200 0.4175 MVKSTGENGSASVAPFLKKCYEMVDDESTHPVISWGKNNDSFVIWDMTEFSVRLLPKYFKHSNVSSFIRQLNIYGFRKIDTDCWEFANEGFIKGQKHLLKTIYRRKNTQTADHQKVLQQKDKSDEPSGLVDALWKEIENLKTDKYALSQELVKLRQNQESAENKLLLLKDRIKGMEKNEQQMLSFLVTVMQNPSLLLQFLQPKDDDWLMDEPSNMLEPVYASNGMIVRYKPPLGGSAEPEYAPAPNPITKPVSGPFSEDLKEFFISSDFLKVLIDEQICPSENHSPFVLSDAADDNSWEQLLRNPALENIEDSELETEEPIESGVGMPSSYVSNASIENSQNFDMLVAEMEKAHYQETQRLAVEEDIIENDQNLENLTEQMGLLASDPKHKRKLGRDAH* 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte14g00513 399 SMART hsfneu3 12 105 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pte14g00513 399 FunFam Heat stress transcription factor B-4 8 106 - -
Pte14g00513 399 Coils Coil 137 178 - -
Pte14g00513 399 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 7 245 IPR027725 -
Pte14g00513 399 Gene3D - 8 106 IPR036388 -
Pte14g00513 399 Pfam HSF-type DNA-binding 16 105 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pte14g00513 399 SUPERFAMILY "Winged helix" DNA-binding domain 12 105 IPR036390 -
Pte14g00513 399 PRINTS Heat shock factor (HSF) domain signature 67 79 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pte14g00513 399 PRINTS Heat shock factor (HSF) domain signature 16 39 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pte14g00513 399 PRINTS Heat shock factor (HSF) domain signature 54 66 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pte14g00513 399 ProSitePatterns HSF-type DNA-binding domain signature. 55 79 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pte14g00513 399 Coils Coil 360 380 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte14g00513 Pte-Chr14 24895934 24899618 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte14g00513 1 387 HSF AT1G67970 43.424 1.16e-89 274
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Pte14g00513 HSF_DNA-bind 2.1e-30 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte14g00513 14 24895934 24899618 Pte14g00513 14 24895934 24899618 RCT